Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0661 ATGAATACTTTCTCTCATGTGCCCCCCGGTTTTAGGTTCCATCCCACAGACGAAGAACTTGTTGATTACTATCTTAGGAAGAAAGTTGCATCAAGGAGGATTGACCTAGATGTCATAAAAGATGTAGACCTCTACAAAATTGAGCCCTGGGATCTTCAAGAGATTTGCAGGATAGGAACAGAAGAGCAAAATGAATGGTACTTCTTTAGCCATAAAGATAAGAAGTATCCAACTGGAACTCGCACAAATAGAGCAACTGCAGCAGGATTTTGGAAAGCAACAGGAAGAGACAAGGCAATCTATTCCAAGCATGACCTGATAGGGATGAGGAAAACCTTAGTCTTTTATAAGGGTCGAGCTCCAAATGGACAAAAGTCAGATTGGATAATGCACGAGTATCGGCTCGAAACAGATGAACATGGCACACCACAGGAAGAAGGATGGGTGGTGTGTAGAGTATTCAAGAAGAGAGTAACAACCATGCGTAAAGTGAGTGAACACGACTCCCCCTGTTGGTATGATGAGCAAGTCTCTTTCATGCAAGACTTGGACTCGCCAAAGCAAACCTCTCAATCTAATTTGGTCTACCAGCTACCATATCCTTGCAAGAAAGAGCTAGATTTGCCATACCAATTGCCTCGAGACCACTATCTTCAGCTTCCACTTTTAGAGAGCCCAAAACTGCTTCAATCTGCTTCTACCATAACCTCTAATCCAATGGCAGCATATGGTCTTGATGTAATAAGCCAGGCTTCTACTCTCTTTCCCTCATCACTCCTACAAGAACAAGAAGTTGGTCGCCAAAACTTTCAGCCACCGTATTGCAACAACAATTCCACTGAACAAGGCGTTGATCAAGTAACTGATTGGCGAGTGCTTGACAAGTTTGTTGCTTCACAGCTTAGTCAAGATACTTCCAAAGACAACAGCTATTCCAACGCAGGCAATATCTTTCACGGCACGGACAATGGCAATGTAGAGTTCAGACATTTGGACAAACAAGAAATAGTGGTGCCTGAAAATGTCTCAACATCCATCTCCAGCTGTCCAATCGATTTGTGGAAATAG 1068 0.4307 MNTFSHVPPGFRFHPTDEELVDYYLRKKVASRRIDLDVIKDVDLYKIEPWDLQEICRIGTEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDEHGTPQEEGWVVCRVFKKRVTTMRKVSEHDSPCWYDEQVSFMQDLDSPKQTSQSNLVYQLPYPCKKELDLPYQLPRDHYLQLPLLESPKLLQSASTITSNPMAAYGLDVISQASTLFPSSLLQEQEVGRQNFQPPYCNNNSTEQGVDQVTDWRVLDKFVASQLSQDTSKDNSYSNAGNIFHGTDNGNVEFRHLDKQEIVVPENVSTSISSCPIDLWK* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0661 355 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 345 - -
Apr5g0661 355 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Apr5g0661 355 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 345 - -
Apr5g0661 355 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Apr5g0661 355 Gene3D NAC domain 16 159 IPR036093 GO:0003677|GO:0006355
Apr5g0661 355 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0661 Apr-Chr5 9113473 9117197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0661 1 355 NAC Transcription Factor Family AT1G12260 55.946 9.51e-133 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Apr5g0661 NAM 3.5e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0661 - - gmx:100809525 609.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0661 5 9113473 9117197 Apr5g0661 5 9113473 9117197 ECH