Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0650 ATGAAACCTCTCCTTTTCTTCCTCACATTCTCCTTCTTTTGCCAGACACACCACCTAGTTTTCTCAGCTACCACCCTCCCACTCCAACTCATCGCCCTTCTCTCCATTAAATCCTCCCTCGTCGACCCTCTCAAGAACCTCCATGACTGGGACCCCACCCCCACCTCCACCTTCTCCAACTCCAATCACCCCATATGGTGTTCTTGGACAGGCATCACGTGCCACCCCAAAACAGCGCAAATCACCACCCTCGACCTCTCCCACCTCAATCTCTCCGGCACAATCTCACGCCAAATCCGCTACCTATCCACCTTAAACCACCTTAACCTCAGCGGAAACGACCTCGGGGGAACATTCCAAACAGCCATTTTTGAACTAACAGAGCTCAGAACTCTAGACATAAGCCACAACTCCTTCAACTCAACCTTCCCACCCGGCATATCCAAACTCAACTTCCTCAGAGTCTTCAATGCCTACAGCAACAGCTTCACCGGGCCTCTCCCTCAAGACCTAACCAGGCTTCGTTTTCTTGAGCAACTCAACCTCGGAGGAAGCTACTTCCGCGACACCATTCCATCAAGCTACGGCAGTTTCCCCAGACTCAAGCTCCTAGATTTAGCCGGCAACGCCTTGGAGGGTCCTCTGCCACCCCAGCTAGGATACTTAACAGAGCTACAACACTTGGAAATCGGATACAACCCATTCACCGGAACATTACCACCGGAACTTGCATTGCTAAAAAACCTCAAATACTTGGACATCTCATCAGCCAACATGTCAGGGAGCGTGATCCCTGAGCTGGGAAACTTGAGCATGCTGGAGACCCTGTTGCTGTTCAAGAACCGGTTAACCGGTGAAATCCCAACAAGCATAGGGAATTTGAAGTCCCTGAAAGCTCTTGACCTGTCAGATAACCAACTCACAGGTCCAATCCCAACCCAAGTCACCATGCTAACCCAACTAAGCACACTGAACCTAATGGACAACAACCTAACCGGAGACATACCAGAAGGAATAGGAGATCTCCAAAACCTGGAAACTCTGTTCCTCTTCAACAACTCACTCACAGGCATTCTCCCTCACCAACTGGGCTCAAATGGAATGCTACAGAGACTGGACGTTTCCACAAACTCACTCGAAGGTCCAATCCCTGCAACCATATGCAAAGGCAACAAGCTCTTGAGGCTCATACTATTCAACAACAAATTCACCAACACTCTCCCACTGTCCTTGGGGAACTGCACATCACTCGCCAGGGTTCGAATCCAGAACAACCACCTGAACGGTTCCATCCCCCAGAGCCTCACGCTCCTCCCCAACCTCACATTTCTGGACATGAGCAACAACAACTTGCAGGGTCCAATTCCTCAACGATTGGGGAATTTGCAATATTTCAACATCTCCGGAAACTCCTTCGGAACGCCCTTGCCTTCCACCATATGGAACGCCACCAATCTTCAGATATTCTCCGCCGCTTCCTCCAATATCACCGCCCAGATTCCCGATTTCGTTGGCTGCCAAACCTTGTACAAGATCGAATTGCAGGGGAACGCCATCAACGGGACCATTCCATGGGATATCTCTCACTGTCAGAAGCTCATTCTCCTCAATCTCAGCAGAAACGCACTCACCGGAATCATTCCCTGGGAAATCTCCGCTCTACCTTCCATCACCGACGTCGATCTCTCCCACAATTCCCTCACCGGCACTATTCCTTCCAATTTCAACAACTGCACCACCCTCGAAAACTTCAACGTTAGTTTCAACTCTCTCACCGGCCCCATCCCCTCCTCCGGCATCTTCCCCAACCTCCACCCCTCCTCCTACTCCGGCAACCGCGGCCTCTGCGGGCGCCTCCTCGCCAAGCCATGCGCCGCCGACACCCTCTCCGCCGCCGACAACCAGCTCGACGTCCGCCGCCAGCAGCCCAAGCGGACCGCCGGTGCAATCGTCTGGATCGTGGCCGCCGCGTTCGGGATCGGCCTCTTCGTGCTCGTCGCCGGCACGCGGTGCTTCCACGCCAATTACGGCGGCCGGTTCGGCAACGACGGGAACGAGATCGGGCCGTGGAAGCTAACGGCGTTCCAACGTCTGAATTTCACGGCGGAGGACGTTCTGGAGTGTCTGTCGATGTCGGATAAGATATTAGGAATGGGGTCGACGGGGACTGTGTACAGAGCGGAGATGCCAGGTGGCGAGATCATAGCGGTTAAGAAGCTGTGGGTCATCGTTCACCGCGATCTCAAACCTAGCAACATTCTTTTGGACGCTGAGATGGAGGCCAGAGTCGCTGATTTTGGGGTCGCCAAGCTTATACAAACCGACGAGTCCATGTCTGTCATTGCCGGTTCCTACGGCTACATTGCTCCAGAATATGCTTACACGTTGCAAGTGGATGAGAAGAGTGATATATACAGCTACGGGGTGGTGTTAATGGAGATCTTAAGCGGAAAACGTTCGGTGGATGCAGAATTTGGCGATGGGAACAGCATTGTGGACTGGGTTAGGTCCAAGATAAAGAGCAAAGATGGTATTGATGATATATTGGATAAGAATGCAGGGGCAGGGTGCTCCTCTGTGAGAGAGGAAATGATACAGATGCTTAGAATTGCATTGCTATGCACAAGTAGGAACCCTGCGGATAGACCTTCCATGAGGGACGTTGTGTTGATGCTGCAAGAGGCCAAGCCCAAGAGAAAATTGCTTGATAGTGTTGTAGGTCGATGTGTTGGGGACACTGTGGTTGCAGGGGATGATATTCCTTTGCCACAAAAGCCCACGCCTGAATGCTAG 2793 0.5224 MKPLLFFLTFSFFCQTHHLVFSATTLPLQLIALLSIKSSLVDPLKNLHDWDPTPTSTFSNSNHPIWCSWTGITCHPKTAQITTLDLSHLNLSGTISRQIRYLSTLNHLNLSGNDLGGTFQTAIFELTELRTLDISHNSFNSTFPPGISKLNFLRVFNAYSNSFTGPLPQDLTRLRFLEQLNLGGSYFRDTIPSSYGSFPRLKLLDLAGNALEGPLPPQLGYLTELQHLEIGYNPFTGTLPPELALLKNLKYLDISSANMSGSVIPELGNLSMLETLLLFKNRLTGEIPTSIGNLKSLKALDLSDNQLTGPIPTQVTMLTQLSTLNLMDNNLTGDIPEGIGDLQNLETLFLFNNSLTGILPHQLGSNGMLQRLDVSTNSLEGPIPATICKGNKLLRLILFNNKFTNTLPLSLGNCTSLARVRIQNNHLNGSIPQSLTLLPNLTFLDMSNNNLQGPIPQRLGNLQYFNISGNSFGTPLPSTIWNATNLQIFSAASSNITAQIPDFVGCQTLYKIELQGNAINGTIPWDISHCQKLILLNLSRNALTGIIPWEISALPSITDVDLSHNSLTGTIPSNFNNCTTLENFNVSFNSLTGPIPSSGIFPNLHPSSYSGNRGLCGRLLAKPCAADTLSAADNQLDVRRQQPKRTAGAIVWIVAAAFGIGLFVLVAGTRCFHANYGGRFGNDGNEIGPWKLTAFQRLNFTAEDVLECLSMSDKILGMGSTGTVYRAEMPGGEIIAVKKLWVIVHRDLKPSNILLDAEMEARVADFGVAKLIQTDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMEILSGKRSVDAEFGDGNSIVDWVRSKIKSKDGIDDILDKNAGAGCSSVREEMIQMLRIALLCTSRNPADRPSMRDVVLMLQEAKPKRKLLDSVVGRCVGDTVVAGDDIPLPQKPTPEC* 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0650 930 ProSiteProfiles Protein kinase domain profile. 586 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0650 930 Pfam Protein kinase domain 743 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0650 930 ProSitePatterns Protein kinases ATP-binding region signature. 716 739 IPR017441 GO:0005524
Apr5g0650 930 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 742 917 - -
Apr5g0650 930 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 4 741 - -
Apr5g0650 930 ProSitePatterns Serine/Threonine protein kinases active-site signature. 743 755 IPR008271 GO:0004672|GO:0006468
Apr5g0650 930 SUPERFAMILY Protein kinase-like (PK-like) 714 896 IPR011009 -
Apr5g0650 930 SMART LRR_typ_2 126 150 IPR003591 -
Apr5g0650 930 SMART LRR_typ_2 438 462 IPR003591 -
Apr5g0650 930 SMART LRR_typ_2 294 318 IPR003591 -
Apr5g0650 930 SMART LRR_typ_2 198 222 IPR003591 -
Apr5g0650 930 SMART LRR_typ_2 342 365 IPR003591 -
Apr5g0650 930 SMART LRR_typ_2 554 577 IPR003591 -
Apr5g0650 930 SUPERFAMILY RNI-like 84 429 - -
Apr5g0650 930 Pfam Leucine rich repeat 320 379 IPR001611 GO:0005515
Apr5g0650 930 Pfam Leucine rich repeat 508 567 IPR001611 GO:0005515
Apr5g0650 930 SUPERFAMILY L domain-like 393 617 - -
Apr5g0650 930 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE TDR ISOFORM X3 742 917 - -
Apr5g0650 930 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE TDR ISOFORM X3 4 741 - -
Apr5g0650 930 Pfam Leucine rich repeat N-terminal domain 29 74 IPR013210 -
Apr5g0650 930 PRINTS Leucine-rich repeat signature 297 310 - -
Apr5g0650 930 PRINTS Leucine-rich repeat signature 438 451 - -
Apr5g0650 930 Gene3D Transferase(Phosphotransferase) domain 1 739 906 - -
Apr5g0650 930 SMART serkin_6 710 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0650 930 Gene3D Ribonuclease Inhibitor 80 337 IPR032675 -
Apr5g0650 930 Gene3D Ribonuclease Inhibitor 338 631 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0650 Apr-Chr5 8951251 8955082 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0650 743 907 Receptor kinase-like Gene Family AT1G08590 54.217 6.41e-55 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Apr5g0650 Pkinase 1.7e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0650 - - aprc:113866081 1864.35