Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0644 ATGGCAAAGCATAGAAGCAACCACGCTGATTTTGAAGTTCCTGCCACTCTGTTGGTTTTGTTGGTGCTTTGTCAATGTACTTTAGGGCTGACACAAGCTCAGGCCCTTCTCAAGTGGAAACAAAGTCTCTCTGACCAACCAATTTTGGGTTCATGGATCACCAATGTCACTGCAACAACTCAAAGTCCTTGTTCATGGCCTGGTATTACTTGTGATTCCCAAGGCAGTGTCATTGTAATAAACTTAGCATACAAAGGACTTGAAGGTACCCTTCAAAACTTGAACTTGTCTGCTTTCCCAAACCTCATTCGTCTTGATCTCAAAGTAAACAAACTCACTGGCACCATACCACAAAATATTGGGGTGCTCTCAAAACTCAAAATTCTTGACCTTTCCACCAATTATCTCGATGGAACTTTACCTCTTTCTATGGCCAATTTGACTCAGCTTTATGAGCTTGATGTGTCAGGAAATGATATAAAAGGGATGTTAGATCCTCGTTTCTTTCCTGATGGAACTGATCACCCCAAAACTGGGCTCATTGCTATAAGGAATCTCTTGTTCCAGGATACCTCTCTTGGTGGCACAATTCCAAATGAAATAGGGAACCTAAAATATTTAACTGTGTTAGTTCTAGATGGAAATAACTTTCATGGGTCTATTCCTCCATCTATATGCAACTGCACCCACTTAAGAGTTCTCAGCATGCTTGAGAATTATCTCTCGGGCAAAGTTCCCCCAAGCATTGGAAAACTGACCAATCTAACTGATCTTCGCTTTTATTCCAACAATTTGTATGGTAAGCTGCCACAAGAATTTGCAAAGCTTTCATCTTTAACTCTGTTGCATATTTCTTGGAACAACTTCACTGGTGAATTGCCACAACTGTGCACCAGTGGTAAGCTTGTAAATTTCAGTGCATCCTACAACAATTTCACTGGCCCAATTCCTGTAAGCCTTAGAAACTGTGCATCTTTATACAGGGTTATACTCCATAACAATCAGCTATCAGGTTATGTGGATCAGGAATTTGGGGTGTATCCCAACCTCACCTACATTGACATCAGCCACAACAAGTTCCAAGGTAGGCTCTCTACAAATTGGGGTGCATGCAAAAACTTGCAATCCCTCACAATGGCTGGGAATGAAATAGGTGGCAATATTCCTGCTGAGATTTTTCAACTGGAGCAGCTAGTTCGACTTGACCTATCATCCAACCAATTATCAGGAGAAATTCCTTTGCAAGAAGGAAAATATCCTATTTTCCTGTCTGAATTAAATTTGAGTAATAACAATCTCTCTGGTATGATACCACCAATAATTGGAAAACTCTCTAATTTGCAGTTGTTGGACCTATCTAAGAACATACTTTGGGGACCACTTCCTCATGAAACAGGTGAATGCTCCAACTTGGTCAGCTTGAATCTGAGCCAAAATGTCTTGAATGACTCAATTCCCTACCAAATAGGAAATCTTGGATCCTTACAAGAATTTTTGGACTTGAGTTACAATGCATTTTCTGGAGAAATTCCTGCTGATCTTGGTAAGCTTAGAAGCTTGATAAGCTTGAATCTCTCTCACAACTACCTCTCAGGTTCTATACCTTATTCACTTGGCAACATGTTGAGCTTGTCATCCATGGACCTCTCCTACAATTATTTGGGTGGCCGTGTTCCTGATGGTGGCATATTCAACTCTTCTCATTTGCCAGATGTAAGCAACAACAGAGATTTATGTGGGAATATTCAAGGTTTGCCAGCTTGCAAGGTCTCACTCACTGAAACTGATGGTGGAGGTAACACTAACAAGGTTGTGATAATCATTTCTTTGGGGGGTGCCCTTTTTCCTTCATTGGTAATTGTTGGGGTTTTATTCTTTATCCATAAGAGGAACTCAGTTGTTCCAACCCAAGAAGACTTGGCAGCCAAGAAAGGAAATCCATTTTCAGTTTGGTACTTTGATGGGAAAGTTGTGTATGAAGAGATAATCGAAGCTACTAACAACTTTGACGACCAATACTGCATTGGAGAGGGGGCACAAGGAAAGGTTTTTAAAGCAGTGATACAAGGTCAAGTATTTGCCATAAAGAAGTTGAAATGTGATGCAGAAAGCATAGATATTGAGAGTATAAAAATCTTCAACAGGGAGGTAGAAGCCTTGACTGAAATACGCCACCGTAACATTGTCAAGCTTTATGGATTTTGCTTTAAAGGGTTGCACTTATTTTTGGTTAATGAGCATATGGATAGGGGGAATCTACATGATATGCTGAGAAATGACAATGAAGCATTAGACCTCGATTGGCCTAAGAGGGTTGATATTGTGAAAGGGGTAGCACAAGCTTTGTCCTATATGCATCATGATTGTGTTCCACCTATAATTCACAGAGACATATCAAGCAAGAATATTCTATTGTCCTCCAATCTTGAAGCTCGTGTCGCAGATTTTGGCACTGCAAAGTTGCTAAATCCTGATGATTCGTCTATGTGGACAAATTTTGCTGGCACATATGGCTATGCTGCTCCAGAGCTTGCTTACTCAATGGCAGTGAGTGAGAAATGTGATGTGTTCAGCTTTGGTGTATTGGCTTTAGAGGTTCTGAAGGGAAAGCACCCTGGTGATCTTGTTTCCTTGATACAATCAAATACTGGTGATCAAATGATAAACTTGCCAGAGATTTTAGACCCACGCCTCTCACCTCCTGCTCCTACAAATATACAGATTTTGAATGAATTGGCATTGATTGCAAATTTAGCTCTATCATGTTTACAAACCAACCCTCAGTCTCGACCAACCATGCAAAGCATAGCTCAGCAACTTGATAAGAGACTCCCAACTACTTTGGTGGTTTTACTTGCTCTATGTCAACGCACTTCAGGCCTAACACAAGCTGAGGCCCTTTTCAGGTGGAAACAAAGTCTTCCTAAACAACCCATTTTGGAGTCATGGGTGATCAGCTCCTCCAATGTAACAACTCAAAGCCCATGTTCATGGCGAGGTATCACTTGTGATTCCCAAGGCAGTGTCACTATAATAAACTTGGCTTACACCGGACTTGCAGGTACCCTTCAAAACTTGAACTTGTCTGTTTTCCCAAACCTTCTTCGTCTTGATCTCAAAGTAAACAATCTCACTGGCCTCATACCACAAAACATTGGCATCCTCTCAAAGCTTCAATTCCTTGATCTTTCTACTAACTATCTAAATGGCACCCTCCCTCTTTCTATTGCCAATTTGACTCAAGTTTATGAGCTTGATATTTCAAGAAATGATATAACTGGGATATTGGACCCTCGCTTATTTCCTGATGGATCTGATCAGCCCAAAAGTGGCCTCATTGGTATCAGGAATCTCCTCTTCCAAGACACCCTTTTAGGTGGTAGAATTCCAAATGAAATAGGGAACATAAGAAACTTGACTCTACTTGCTCTTGATGGAAACAGCTTCTATGGTCCTATTCCTCCATCTCTTGGTAATTGCACACATTTAAGCATTCTTAGAATGCCTCAAAATCAGCTCTCAGGCCCAATTCCCCCTAGTATTGGTAAATTAACCAATCTAACCGATGTGCGCTTTTTCACTAACAACTTAAATGGCACTGTGCCACAAGAGTTTGGAAACTTGTCTTCCTTAACTGTGTTGCATCTTGCTGAAAACAACTTTATTGGTGAATTACCACCACAAGTGTGCAAAAGTGGCACTCTTGTGAATTTCAGTGCAGCCTACAATAGTTTCACTGGCCCAATTCCAAAAAGCCTTAAAAACTGCCCAGCCTTGTATAGAGTTAGACTTGAATACAACCAGCTGACAGGTTATGCAGATGAGGATTTTGGAGTGTATCCTAATCTCACTTACATGGACTTCAGCTATAACAGGGTGCAAGGTGAGTTCTCTGCAAATTGGGGTTCCTGTAAAAACATGCAATTACTTAGAATGGCAGGGAATGCTGTGAGTGGCAGCATTCCAAGTGAGATTTTTCAGTTGAACCAACTACAAGAGCTTGATCTATCGTCTAATCAAATATCAGGAGAGCTTCCACCACAGATAGGAAATTCCTCCAACTTGTATGAATTAAATTTGAGTGATAACAAACTCACAGGTATGATACCGGCAGAAATTGGAAAGATTTCCAATTTGAGGTCTTTGGACCTGTCTATGAACTTGCTGTTGGGACCAATCCCAAGTCAGATAGGGGACATCTCCAACTTGCAGAATTTAAATTTGAGCAACAATCACTTGAATGGCACAATCCCTTATCAAATTGGAAACCTTGCAGCTTTACAAGACTTCTTGGACTTGAGTTACAATTCACTTTCGGGAGAAATTCCTGATCTTGGGAAGCTTTCAAATCTGATAAGCTTGAATATCTCTCACAACAATCTGTCAGGTCCAATTCCTGACTCACTTAGTGAAATGTTGAGCTTGTCAGCCGTAAACCTCTCCTATAATAATTTGGAGGGTCCTGTTCCTACAGGCGGCATATTCAACTCTTCTCATCATCCACTGGATTTGAGCAACAACAAAGATTTGTGTGGGAATATTAGAGGTTTGAGACCCTGTAATGTCTCTCTCACTCAACCAAATGGTGGATCAAGTCACAACAACAAGGTTGTGATCCCTATTGTTGCTTCTTTGGGAGGCGCTCTTGTTCTCTCATTGGTTATAGTTGGTATTTTTTTCTTTTGCTGTAAGAGAAAGTCAAGAGCTCCAAGGCAAAAAACCTCCTTCAACAGACCAAATCCATTTTCAATTTGGTACTTTAATGGTAAAGTTGTGTATGCAGACATCATTGAAGCTACTAAGAACTTTGACAACGAGTATTGCATTGGTGAAGGAGCACTGGGAAAAGTTTATAAAGCGGAGATGAAAGGAGGTCAAGTATTTGCTGTAAAAAAGTTGAAATGTGATGCAGACAACTTAGATTTTGAGAGTATAAAAACCTTTGAGAGTGAGGTAGAAGCCATGACAGAAACACGGCACAGAAACATTGTGAAGCTTTATGGATTTTGCTCTGAAGGGGTGCACACGTTTTTGATTTATGAGTACATGGATAGGGGGAACTTATCTGACACGCTGAGAGATGACAAGGAAGCATTAGAATTAGATTGGCATAAAAGGTTTGACATCATCAAAGGTGTAGCAAGCGCTTTGTCCTACATGCATCATGATTGTGCTCCACCTTTAATTCATAGAGACATATCAAGCAAGAACATTTTATTGTCCACCAATCTTAAAGCTCATGTCTCAGATTTTGGCACTGCCAGGTTTCTGAAGCCTGATTCGCCTATTTGGACATCATTTGCCGGCACATATGGCTATGCTGCTCCAGAGCTTGCTTACACAATGGCAGTGACAGAGAAATGTGATGTGTTCAGCTTTGGTGTTTTGGCATTTGAGATTCTTACAGGAAGGCACCCTGGTGATATTGTTTCCTACATACAAACTTCAAGTGAACAAAAAATAAACTTAAAAGAGATTTTAGATACTCGTCTACCACCTCCTGCGAAGAGCCATGTTTTGAAGGAATTGCAATTAATTGCAAACCTTGCTCTCTCTTGTTTGCAAACAAACCCTCTATCTCGACCAACTATGAGAAGCATAGCTCAGCTTCTTGAAATGGAGACTTCAGATATGAGATAA 5640 0.406 MAKHRSNHADFEVPATLLVLLVLCQCTLGLTQAQALLKWKQSLSDQPILGSWITNVTATTQSPCSWPGITCDSQGSVIVINLAYKGLEGTLQNLNLSAFPNLIRLDLKVNKLTGTIPQNIGVLSKLKILDLSTNYLDGTLPLSMANLTQLYELDVSGNDIKGMLDPRFFPDGTDHPKTGLIAIRNLLFQDTSLGGTIPNEIGNLKYLTVLVLDGNNFHGSIPPSICNCTHLRVLSMLENYLSGKVPPSIGKLTNLTDLRFYSNNLYGKLPQEFAKLSSLTLLHISWNNFTGELPQLCTSGKLVNFSASYNNFTGPIPVSLRNCASLYRVILHNNQLSGYVDQEFGVYPNLTYIDISHNKFQGRLSTNWGACKNLQSLTMAGNEIGGNIPAEIFQLEQLVRLDLSSNQLSGEIPLQEGKYPIFLSELNLSNNNLSGMIPPIIGKLSNLQLLDLSKNILWGPLPHETGECSNLVSLNLSQNVLNDSIPYQIGNLGSLQEFLDLSYNAFSGEIPADLGKLRSLISLNLSHNYLSGSIPYSLGNMLSLSSMDLSYNYLGGRVPDGGIFNSSHLPDVSNNRDLCGNIQGLPACKVSLTETDGGGNTNKVVIIISLGGALFPSLVIVGVLFFIHKRNSVVPTQEDLAAKKGNPFSVWYFDGKVVYEEIIEATNNFDDQYCIGEGAQGKVFKAVIQGQVFAIKKLKCDAESIDIESIKIFNREVEALTEIRHRNIVKLYGFCFKGLHLFLVNEHMDRGNLHDMLRNDNEALDLDWPKRVDIVKGVAQALSYMHHDCVPPIIHRDISSKNILLSSNLEARVADFGTAKLLNPDDSSMWTNFAGTYGYAAPELAYSMAVSEKCDVFSFGVLALEVLKGKHPGDLVSLIQSNTGDQMINLPEILDPRLSPPAPTNIQILNELALIANLALSCLQTNPQSRPTMQSIAQQLDKRLPTTLVVLLALCQRTSGLTQAEALFRWKQSLPKQPILESWVISSSNVTTQSPCSWRGITCDSQGSVTIINLAYTGLAGTLQNLNLSVFPNLLRLDLKVNNLTGLIPQNIGILSKLQFLDLSTNYLNGTLPLSIANLTQVYELDISRNDITGILDPRLFPDGSDQPKSGLIGIRNLLFQDTLLGGRIPNEIGNIRNLTLLALDGNSFYGPIPPSLGNCTHLSILRMPQNQLSGPIPPSIGKLTNLTDVRFFTNNLNGTVPQEFGNLSSLTVLHLAENNFIGELPPQVCKSGTLVNFSAAYNSFTGPIPKSLKNCPALYRVRLEYNQLTGYADEDFGVYPNLTYMDFSYNRVQGEFSANWGSCKNMQLLRMAGNAVSGSIPSEIFQLNQLQELDLSSNQISGELPPQIGNSSNLYELNLSDNKLTGMIPAEIGKISNLRSLDLSMNLLLGPIPSQIGDISNLQNLNLSNNHLNGTIPYQIGNLAALQDFLDLSYNSLSGEIPDLGKLSNLISLNISHNNLSGPIPDSLSEMLSLSAVNLSYNNLEGPVPTGGIFNSSHHPLDLSNNKDLCGNIRGLRPCNVSLTQPNGGSSHNNKVVIPIVASLGGALVLSLVIVGIFFFCCKRKSRAPRQKTSFNRPNPFSIWYFNGKVVYADIIEATKNFDNEYCIGEGALGKVYKAEMKGGQVFAVKKLKCDADNLDFESIKTFESEVEAMTETRHRNIVKLYGFCSEGVHTFLIYEYMDRGNLSDTLRDDKEALELDWHKRFDIIKGVASALSYMHHDCAPPLIHRDISSKNILLSTNLKAHVSDFGTARFLKPDSPIWTSFAGTYGYAAPELAYTMAVTEKCDVFSFGVLAFEILTGRHPGDIVSYIQTSSEQKINLKEILDTRLPPPAKSHVLKELQLIANLALSCLQTNPLSRPTMRSIAQLLEMETSDMR* 1880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0644 1879 Gene3D Ribonuclease Inhibitor 173 296 IPR032675 -
Apr5g0644 1879 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 948 1875 - -
Apr5g0644 1879 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 6 942 - -
Apr5g0644 1879 SMART LRR_sd22_2 252 281 - -
Apr5g0644 1879 SMART LRR_sd22_2 1376 1402 - -
Apr5g0644 1879 SMART LRR_sd22_2 444 463 - -
Apr5g0644 1879 SMART LRR_sd22_2 1328 1354 - -
Apr5g0644 1879 SMART LRR_sd22_2 395 416 - -
Apr5g0644 1879 SMART LRR_sd22_2 123 149 - -
Apr5g0644 1879 SMART LRR_sd22_2 1055 1081 - -
Apr5g0644 1879 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1728 1740 IPR008266 GO:0004672|GO:0006468
Apr5g0644 1879 SMART serkin_6 1603 1871 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0644 1879 SMART serkin_6 669 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0644 1879 Gene3D Transferase(Phosphotransferase) domain 1 748 947 - -
Apr5g0644 1879 Gene3D Transferase(Phosphotransferase) domain 1 1683 1878 - -
Apr5g0644 1879 Gene3D Ribonuclease Inhibitor 30 172 IPR032675 -
Apr5g0644 1879 Gene3D Ribonuclease Inhibitor 961 1103 IPR032675 -
Apr5g0644 1879 ProSiteProfiles Protein kinase domain profile. 1603 1873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0644 1879 Gene3D Phosphorylase Kinase; domain 1 1566 1682 - -
Apr5g0644 1879 Gene3D Phosphorylase Kinase; domain 1 638 747 - -
Apr5g0644 1879 Gene3D Ribonuclease Inhibitor 1193 1522 IPR032675 -
Apr5g0644 1879 Gene3D Ribonuclease Inhibitor 297 591 IPR032675 -
Apr5g0644 1879 SUPERFAMILY RNI-like 1177 1511 - -
Apr5g0644 1879 SUPERFAMILY Protein kinase-like (PK-like) 1577 1873 IPR011009 -
Apr5g0644 1879 SUPERFAMILY Protein kinase-like (PK-like) 650 940 IPR011009 -
Apr5g0644 1879 SUPERFAMILY RNI-like 973 1226 - -
Apr5g0644 1879 Pfam Leucine rich repeat 1330 1389 IPR001611 GO:0005515
Apr5g0644 1879 Pfam Leucine rich repeat 100 160 IPR001611 GO:0005515
Apr5g0644 1879 SUPERFAMILY L domain-like 54 410 - -
Apr5g0644 1879 Pfam Protein kinase domain 674 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0644 1879 Pfam Protein kinase domain 1607 1869 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0644 1879 SMART LRR_typ_2 1328 1352 IPR003591 -
Apr5g0644 1879 SMART LRR_typ_2 276 299 IPR003591 -
Apr5g0644 1879 SMART LRR_typ_2 147 171 IPR003591 -
Apr5g0644 1879 SMART LRR_typ_2 517 541 IPR003591 -
Apr5g0644 1879 SMART LRR_typ_2 1448 1472 IPR003591 -
Apr5g0644 1879 SMART LRR_typ_2 204 228 IPR003591 -
Apr5g0644 1879 SMART LRR_typ_2 123 146 IPR003591 -
Apr5g0644 1879 SMART LRR_typ_2 444 468 IPR003591 -
Apr5g0644 1879 SMART LRR_typ_2 395 419 IPR003591 -
Apr5g0644 1879 SMART LRR_typ_2 1400 1424 IPR003591 -
Apr5g0644 1879 SMART LRR_typ_2 1208 1232 IPR003591 -
Apr5g0644 1879 SMART LRR_typ_2 252 275 IPR003591 -
Apr5g0644 1879 SMART LRR_typ_2 1079 1103 IPR003591 -
Apr5g0644 1879 SMART LRR_typ_2 1055 1078 IPR003591 -
Apr5g0644 1879 Pfam Leucine Rich Repeat 1450 1470 IPR001611 GO:0005515
Apr5g0644 1879 ProSiteProfiles Protein kinase domain profile. 669 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0644 1879 Pfam Leucine rich repeat N-terminal domain 31 72 IPR013210 -
Apr5g0644 1879 Pfam Leucine rich repeat N-terminal domain 962 1004 IPR013210 -
Apr5g0644 1879 ProSitePatterns Tyrosine protein kinases specific active-site signature. 793 805 IPR008266 GO:0004672|GO:0006468
Apr5g0644 1879 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 6 942 - -
Apr5g0644 1879 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 948 1875 - -
Apr5g0644 1879 Gene3D Ribonuclease Inhibitor 1105 1192 IPR032675 -
Apr5g0644 1879 SUPERFAMILY L domain-like 331 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0644 Apr-Chr5 8846844 8859994 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0644 97 842 Receptor kinase-like Gene Family AT4G08850 43.122 5.79e-174 554
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Apr5g0644 Pkinase 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0644 - - aprc:113866080 3681.34