Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0636 ATGGCATTTCACGTAGCTTGTCCAATTACATGTCGCCGAATCTGCTTCTGCGCGTTAGGGTTTCCTCGCGCTCTCCATGCTCCCGACCCTACCAATGCCTTCCTCCACCAAGTTGCCGCTGTTCGCGACTTCCTCGCCGACACTCGCAGCGACGACGCAACCATTCAGGTTCCCGTTCCCAAGGTCCTGCCGCCGCCCCCGCCGCCGCCCGATGGTGCTCCTCTTGGTGTTGACGCGCTCGATGAGTCCGCCTCCATGAAGGCTAGGCGCGTTGCGCTCCAGCGCAAGGGCGCCGCCGCCAGGATTGCCGCTGAGGAGTACGCTCGCCGATTTGAATCCGGCGATGTGGTGGATACGCCAGGAAATCTTGCTGGAGAGGAACAAGGTCAATCCAATGTCAAAGTCTTTTGTCGAATGTGCAATCGTGGTGAAAATGAAGGATCTGAGAAAGCTAAGAAGATGCTATCTTGTAAAAGTTGTGGTAAGAAATACCATAGGAACTGCTTGAGAAGTTGGGCTCAACATAGAGATTTATTTCATTGGAGTTCGTGGACCTGTCGTGCTTGCCGAATTTGTGAGGCTTGCAGAAGAACTGGGGATCCAAGTAAGTTCATGTTTTGCAAAAGGTGCGATGGTGCTTACCACTGTTATTGTCTGCAACCTCCTCATAAGAATGTTAGTACTGGGCCCTATTTGTGCCCAAAACACACAAGGTGTCACAGTTGCGGATCCAATGTCCCGGGAAATGGACTAAGTGTGAGGTGGTTTTTGGGATACACCTGCTGTGATGCATGTGGAAGATTGTTTGTGAAAGGGAACTACTGTCCTGTTTGTTTGAAGGTTTACAGAGATTCAGAGTCAACACCAATGGTTTGTTGTGATACTTGCCAACGCTGGGTACATTGCCAGTGTGATGATATTAGTGATGAAAAATATCTCCAATTTCAAGTTGATGGGAATTTGCAGTATAAATGTCCCACGTGTCGTGGGGAATGTTATCAGGTCAAGAATCTTGAGGATGCTGTTCAAGAGCTTTGGAGGAGAAGGAATATTGCTGACAGAGATTTGATTGTTAGCTTGAGGGCTGCAGCTGGTTTACCAACTCAAGAAGAAATATTTTCTATTTCGCCATATTCAGATGATGAGGATAGTGGGCCTTTGAAATTAAAGAGCGAATCTGCACGTTCCTTTAAGTTTTCTCTAAAAAATTTGGGCAATAACTCACCAAAGAAGATGAAAGATTATGGAAAGAAATCTTCAAGCAAAAAGACTGCTAAGAAAAAGGACTCTCAGTCATTTATGACTAGTAAAATTGACACACACCATAGTTTTGAAGGACATAGTGATATTAAATCTTTGCATAGCTTGGATGATGACAAGAATGATGATATACAATCCCAGAGAAATGAAGGTCCAGATGTTTACTCATCACCTGCTACTGGAAGCCTGAGTCAAACTGAAGCATCTTGCCCTATCAATCAGCCAGGGATTTTGAAACACAAGTTTGTTGATGAGGTGATGGTCAGTGATGAAGAGAGGAAACCTAGAGTTGTTCGAATTAAAAGCAACAGGGCACATATTCTGGACAGTGAAGAGGAGAGTGGAAAACACAGTGATAAGACTCAGAATGTGAAAGGGAAGAAATTGGTTATAAATTTGGGGGCACGGAAAATTAATGTGGCTACTTCCCCACGGTCTGACACTTCAAGCTGTCAAAAAGATCAAGATCTGGTGACTGTTAATGGAAATGACGATATAAGCCAATGGAGGAAGGGGGACAAGTTTGCATTTGATAGGCATGATGGCACAGCAAGGCATATTGATGGTAAAGGAAATTTGATTAAGCTTGGAAAAGTTAAGCCAGATGTTTCTGAAATTAACCTGACCTCTGGTAGAGGCAATATGTCTGATGGGCAGGGAAAACGTAGTACTGATGGAATGATTGATCAAGTTGGAATAGAGGCCACATCAAGAGGTGAAAGGACGTATTTTAGGAAGCAATCAGCTGGCAGTTCTGATGCACGTGATGAGACAGATGACAATAATAATCGTACCCCTTCACATTCTTTGCCAAAAGATTCTAAACCTTTACTAAGATTTAAATTCAAGAAACCCAGCATTGAAAGTCAAAATTCTCCGCAACAGGAGGAGGAGAAAACAACAATTAAGGGCCAGAGGTCGAAAAGGAAGAGACCTTCACCTTTTAAGGAGAAGGCATCATTTAACGAGTCTGAAGATGTAAGTCAATCACATCAAGACAGTGTAATGGATGAGATCATGGATGCAAATTGGATATTAATGAAATTGGGCAATGATGCCATTGGAAAGAGAGTTGAAGTTCATCAGACATCCGACAATTCTTGGCGCAGGGGAGTGGTTACTGACGTAGTTGAAGGCACTTCAAAGTTGCATGTTACCTTAGATGATGGAAAGGTGAAGATGTTGGAACTCAGGAAACAGGGAGTCCGTTTTGTTCCGCAAAAACAGAAGAGATCAAAGACATGA 2505 0.4399 MAFHVACPITCRRICFCALGFPRALHAPDPTNAFLHQVAAVRDFLADTRSDDATIQVPVPKVLPPPPPPPDGAPLGVDALDESASMKARRVALQRKGAAARIAAEEYARRFESGDVVDTPGNLAGEEQGQSNVKVFCRMCNRGENEGSEKAKKMLSCKSCGKKYHRNCLRSWAQHRDLFHWSSWTCRACRICEACRRTGDPSKFMFCKRCDGAYHCYCLQPPHKNVSTGPYLCPKHTRCHSCGSNVPGNGLSVRWFLGYTCCDACGRLFVKGNYCPVCLKVYRDSESTPMVCCDTCQRWVHCQCDDISDEKYLQFQVDGNLQYKCPTCRGECYQVKNLEDAVQELWRRRNIADRDLIVSLRAAAGLPTQEEIFSISPYSDDEDSGPLKLKSESARSFKFSLKNLGNNSPKKMKDYGKKSSSKKTAKKKDSQSFMTSKIDTHHSFEGHSDIKSLHSLDDDKNDDIQSQRNEGPDVYSSPATGSLSQTEASCPINQPGILKHKFVDEVMVSDEERKPRVVRIKSNRAHILDSEEESGKHSDKTQNVKGKKLVINLGARKINVATSPRSDTSSCQKDQDLVTVNGNDDISQWRKGDKFAFDRHDGTARHIDGKGNLIKLGKVKPDVSEINLTSGRGNMSDGQGKRSTDGMIDQVGIEATSRGERTYFRKQSAGSSDARDETDDNNNRTPSHSLPKDSKPLLRFKFKKPSIESQNSPQQEEEKTTIKGQRSKRKRPSPFKEKASFNESEDVSQSHQDSVMDEIMDANWILMKLGNDAIGKRVEVHQTSDNSWRRGVVTDVVEGTSKLHVTLDDGKVKMLELRKQGVRFVPQKQKRSKT* 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0636 834 MobiDBLite consensus disorder prediction 627 643 - -
Apr5g0636 834 ProSitePatterns Zinc finger PHD-type signature. 137 189 IPR019786 -
Apr5g0636 834 MobiDBLite consensus disorder prediction 411 467 - -
Apr5g0636 834 SMART PHD_3 136 190 IPR001965 -
Apr5g0636 834 SMART PHD_3 274 329 IPR001965 -
Apr5g0636 834 SMART PHD_3 191 237 IPR001965 -
Apr5g0636 834 Pfam PHD-finger 274 329 IPR019787 -
Apr5g0636 834 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 269 331 IPR013083 -
Apr5g0636 834 PANTHER PHD FINGER FAMILY PROTEIN 2 828 - -
Apr5g0636 834 ProSiteProfiles Zinc finger PHD-type profile. 134 192 IPR019787 -
Apr5g0636 834 MobiDBLite consensus disorder prediction 526 545 - -
Apr5g0636 834 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 128 246 IPR013083 -
Apr5g0636 834 MobiDBLite consensus disorder prediction 400 495 - -
Apr5g0636 834 ProSiteProfiles Zinc finger PHD-type profile. 272 331 IPR019787 -
Apr5g0636 834 CDD PHD_SF 136 189 - -
Apr5g0636 834 SUPERFAMILY FYVE/PHD zinc finger 272 330 IPR011011 -
Apr5g0636 834 MobiDBLite consensus disorder prediction 625 752 - -
Apr5g0636 834 SUPERFAMILY FYVE/PHD zinc finger 181 242 IPR011011 -
Apr5g0636 834 PANTHER HISTONE ACETYLTRANSFERASE 2 828 - -
Apr5g0636 834 SUPERFAMILY FYVE/PHD zinc finger 130 190 IPR011011 -
Apr5g0636 834 MobiDBLite consensus disorder prediction 526 544 - -
Apr5g0636 834 MobiDBLite consensus disorder prediction 468 492 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Apr5g0636 PHD 7.3e-07 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0636 - - gmx:100815407 1438.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0636 5 8751513 8758697 Apr5g0636 5 8751513 8758697 ECH