Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0631 ATGGAGGAAGTTCAGGAGCCTCAAAACCAACCATCACAAGAAAATGAGATCATCACTGAAAGTTCAGCATTTGTTAAAGGAGAACCTGCAGAAGAATTTACTAGTAGCCCCCCAAAAGTTGATTCTGAAGCTGAAGTCCTTCACGAGAAGGTCACCAAACAAATAATTAAGGAAGGTCATGGCCAGAAACCATCCAAATATTCAACTTGCTTCTTTCATTACAGGGCATGGTCTGAGAGCACTCAGCACAAGTTTGAAGACACATGGCAGGAGCAACGGCCAATTGAGATGGTTTTAGGAAAAGAGAAGAAAGAAATGACTGGCTTGGGCATTGGTGTGGCAAGCATGAAAGCTGGGGAGCGAGCATTGCTGCATGTGGGCTGGGAATTAGGATATGGAAAGGAAGGAAGTTTTTCTTTTCCAAATGTTCCTCCTATGGCAGATTTAGTTTATGAAGCTGAGCTTATTGGCTTTGATGAAATAAAAGAAGGGAAAGCTCGCAGTGATATGACTGTGGAGGAAAGGATTGGAGCAGCAGACAAAAGAAAGATGGATGGAAATGCTTTGTATCAGGAAGAAAAACTAGAGGAGGCTATGCAACAGTATGAAATGGCCATAGCATATATGGGAGATGACTTCATGTTCCAGTTGTTTGGGAAGTATAGAGATATGGCTCTGGCTGTAAAGAATCCTTGCCATCTTAACATGGCAGCCTGTTTGATTAAGCTGAATCGCCATGAAGAAGCTATAGGACAATGCAGCATTGTGCTGAGTGAGGAAGAGAACAATGTGAAGGCATTATTTAGGCGAGGCAGGGCTAGAGCAGCACTTGGGCAAACAGATGCTGCCAGGGAAGATTTTCTAAAAGCACGTAAACATGCCCCTGAAGATAAAGCAATTGCAAGAGAATTGAGGTTGCTTGCTGAACATGACAAGGCTGTTTATCAAAAGCAGAAAGAGATCTACAAAGGAATATTTGGACCAAGACCTCAACCAGTACCTCAGCAAACAAATTGGGTGATACTTATTTGGCAGTCGTTGCTTGCAGTATTTTATCGGCTTATCGCGCTGTTCAAGCGGGGGAGGCTTAAATCTGACTAA 1101 0.4305 MEEVQEPQNQPSQENEIITESSAFVKGEPAEEFTSSPPKVDSEAEVLHEKVTKQIIKEGHGQKPSKYSTCFFHYRAWSESTQHKFEDTWQEQRPIEMVLGKEKKEMTGLGIGVASMKAGERALLHVGWELGYGKEGSFSFPNVPPMADLVYEAELIGFDEIKEGKARSDMTVEERIGAADKRKMDGNALYQEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLIKLNRHEEAIGQCSIVLSEEENNVKALFRRGRARAALGQTDAAREDFLKARKHAPEDKAIARELRLLAEHDKAVYQKQKEIYKGIFGPRPQPVPQQTNWVILIWQSLLAVFYRLIALFKRGRLKSD* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0631 366 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 67 159 IPR001179 GO:0003755
Apr5g0631 366 MobiDBLite consensus disorder prediction 1 20 - -
Apr5g0631 366 SUPERFAMILY TPR-like 170 321 IPR011990 GO:0005515
Apr5g0631 366 MobiDBLite consensus disorder prediction 1 43 - -
Apr5g0631 366 SUPERFAMILY FKBP-like 44 158 - -
Apr5g0631 366 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP42-RELATED 34 327 - -
Apr5g0631 366 ProSiteProfiles TPR repeat profile. 264 297 IPR019734 GO:0005515
Apr5g0631 366 SMART tpr_5 264 297 IPR019734 GO:0005515
Apr5g0631 366 SMART tpr_5 230 263 IPR019734 GO:0005515
Apr5g0631 366 SMART tpr_5 179 212 IPR019734 GO:0005515
Apr5g0631 366 Gene3D - 35 160 IPR046357 GO:0003755
Apr5g0631 366 Pfam Tetratricopeptide repeat 265 297 IPR013105 -
Apr5g0631 366 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 63 156 IPR001179 GO:0003755
Apr5g0631 366 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 34 327 - -
Apr5g0631 366 Gene3D Tetratricopeptide repeat domain 161 292 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0631 50 326 Calmodulin-binding Proteins AT3G25230 31.786 7.73e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0631 - - aprc:113865048 701.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0631 5 8689195 8693165 Apr5g0631 5 8689195 8693165 ECH