Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0629 ATGAAGAGATTGAGGTCCAGCGACGATCTCCACTCGTACGGCGACAAGAATGCCTGCAAGGATTCGAATCTGAATCGGTCCTTTTCCTCTGCGCAGCGAAGCTTTTACTACAAACCCGATAATGCGCGCAAGGGTTTGCCGTCGTCCTCGTCATCGCGCTACGACAGGGATCGGACGGCGGAGGAGGATCGGGAGAGTTCGAGGTTGGTTCGTAAGCGATCGGAGCATGATTTCGAGGGTTTTGATCGGAGGAAGGGGTTCGATCGGTATAGAGACGGCGGTTATAGCGGTGGGGGAGGGGATAGGAGTTTGATTCACCGGTCGGAGAGTTTCTGTGGTTCGAGGAGGGAGTTTCCGAAGGGGTTCCGGTCGGAGAGAGACCGGTCTAGAAGGGAGGGAAGCGTGTCGTCCTGGCGGAGAGGTTTGAAGGATTTCGATGAGAGTGGGAGAGGGAGTAGAGTTTCTGTGGAGGACAGAGTAGTGCGTTCCCCTAAGGGTTTGAGGGATGTGAAGTCTCCTACGTGGTCGAAGGATTCTGAGAGTGAGCAATCTAAGAAGAGATCTTCTTCTCCTAGAGTCTTGAGAGATGCCAAATCCAAGTCCAAGTCTCCCACTTGGTCTAAGGATTCAGAGAGCGAGCAATCCAAGAGTGAACAATCTAAGAGCGTTGAGGTGAAGAAAACTGAGGAGTTGCAGGTTCAGAGTGGAAGCAGTAGTGAAATGGAAGAAGGGGAGCTGGAACCTGAACCCCTTCCTCCAACTGAACCCCAAGCGGCTCCTAAAGATGCCCCTATTATTGCAAGTGAAGACCTTCCCTCTGTCCCTTTGGGAACTGATGATGACAAGCTTGTTCAGAATGAATGCCACCTTAAGGACATAGATACTGCCATGGATGAAGGACAGGGTTTATCGAGTAAGGAGGAGGTGAAATCCAATGAGGAGGTTGATTCTAAAGTGCAAGATCCGGAGAAAGAAGCTGATAAGCTGCCAGATGTTCAAGATGATACAACTGAGAAAATGCTTGTTACTGAGACTGATCGGGACACTGTGAGTAATGGTGATGATAAAAAAGAGGAGTGTTTGGATGCTGATACTGAGTGCAAGGAGGAAACAAACAAGGGTGATGATGCGGAGGAGGAATTGTTTGATGAGGAGGAGCGGAAGGAGGACAAGGGTTTGGATCTAGAAACCAGCACAGATGTTGGCAAACCTGAGTTAAATGATGAAGTGTCACCAGAAAATGATGTTCCCAAGGAAGTAAATAGAGAAATGATGGAGGAGAGTATGGCCAACAATGCAAAGGATAAAGGCAAAGGCGTCTCTGTTGCACCTACTGATACTGATGTTGCTCATTCTTCAGAAGATGGCCTGTGGATTGACAGAGGATCAAGAGATATCGCTACATGTTCTGTTGATGTCATAGAAGGTCCAAGCACAAGGGGATTTGAGTTGTTTTCCAGATCTCCTGTTAGAAAAGTGGAGAAAGTAGATAATGCAGTTCTCAACAAGCAGAAGGATGACATGGGGCAGCTTGATCTCACTCTTAGCTTGCCAAATGTTCTGTTACCTATTGGTGCTCATGAGAGTGGTGCTTGCGAGACAACAACGCAAGCCCCTGGATCCCCCAGTCAAGCACGGAGTGTGCAGTCTTTAAGTAATACATTTTGTACAAACTCAGATGGTTTTACTGCATCGATGTCTTTTTCAGGTTCCCAATCATTCTATCACAATCCAAGCTGTTCTCTAACAAAAAATTCTGTGGACTATGAACAATCTGTTGGTAGTCGCCCTTTATTCCAGGGAATAGATCAACTTTCCCAAGGATGCTGGCAAGGTCAATCTCAGAGCGATCCTAAACAGAAAGAAGTTCCTTTTGGTCAGAAATCTTTGGCGAATGGAAATGGCTCCTTTTATCAGTCTCCATCATGGGGTGTTTTAGACAGTCAAGCTGTGAAAGGTCAACATTCTAGGGTTCTAGAAGGTAGCTCAAAGATGGGCTGTGGACTTGACAGGCAATTAAGTTTTCATAAGCAGTTGTCAGGACAGTCAAGACGCCATGACGATGTTAGATCTCCTTCACAGAGTGTTGGGTCGCATGATATTGGATCAAATTACAGCTTTGAGAAAAAGAGGGAGGCCAGAGATAGGAATGGTGGTAGTCTGTATAGAACTACCAGCCAGAAGGAACACGAACAACTTCTGATGGGTGGAGCTGATTTTGTTGAGACGATCATTGCAAAAATAGTTTCTGAACCTGTGCATACAATGTCCAGAAAGTTCCATGAAATGACTGGGCTGTCCATAGTTTGTCTGAAAGAGGGTATTCGAGAAATCATGCTCAATCAAGATAAGCATGGGCAGATACTTGCTTTTCAGAAAGTTCTGCAGAACAGGTCCGATATAACCTTGGATGTCCTGCTGAAGTGCCACCGTGTGCAACTGGAAATTTTGGTTGCTTTAAAAACTGGTTTGACTCATTTTCTTCACCTTGACAACAGCATGTCATCTTCTGAGTTAGCTCAAATTTTTCTGAACTTGAGATGTAAGAATATTTCCTGTCGAAGTCAGTTGCCTGTGGATGAATGTGATTGCAAGGTTTGTGCGCAGAAGAATGGTTTTTGCAGGGAATGTATGTGCCTTGTGTGTTCTAAGTTTGACAATGCCTCAAATACATGTAGTTGGGTTGGATGTGATGTTTGCCTTCACTGGTGCCATACTGACTGTGGACTACGGGAATCTTATATTAGAAATGGGCATAGTACTACTGGGTCAAAAGGGATGACCGAGATGCAGTTTCACTGTATTGCTTGTGATCATCCTTCTGAGATGTTTGGCTTTGTCAAGGAGGTGTTTCATAATTTTGCAAAAGAATGGTCAGTCGAAACCCTTTGCAAAGAACTTGAATATGTAAAGAGAATATTTTCTGCTAGCAAGGATATGAGAGGGAGACAGCTGCATGAGCTGGCAGAGCAAATGCTACCAAGATTGGCAAATAAGTCTAATCATCCTGAGGTTTTGAGGCATATCATGTCTTTCCTTTCCGATGGTGATTCTTCCAAATTAGCCATGACAACGAACTTTTCTGGGAAGGAACAAATTAAAGAAAACAATGGAGTAGCTGGGCCCAGCCTGGAAGCTGCTTGGATGAAATCTATTTATTCAGAAAAGCCACCTCTGTTAGAAAGGCCTGCTAACATCCTCCCTGGCTATGATCAGAATGATAAAAGGACGCATGCGCAAGATTTGCAGATGAGTAGTAACCAAAAAGACTTCTGTTTTGATGAATTGGAGAGTATAGTAAAAATTAAACAAGCAGAGGCTAAAATGTTTCAATCACGTGCTGATGATGCTAGAAGAGAAGCTGAAGGGTTGAAACGCATTGCCCTAGCAAAGAATGAGAAAATTGAAGAAGAATATACCAATCGAATTGCCAAGTTGCGATTGGCTGAGACTAATGAAACGCGTAAACAAAAAATTGAAGAACTCCAAGCACTAGACAGGGCACATCTGGAGTATTTGAACATGAAAAGGAGAATGGAGGCAGACATCAAAGATCTGTTATCCAAAATGGAAGCTACTAAAATGAGCCTTACCATGTGA 3600 0.4456 MKRLRSSDDLHSYGDKNACKDSNLNRSFSSAQRSFYYKPDNARKGLPSSSSSRYDRDRTAEEDRESSRLVRKRSEHDFEGFDRRKGFDRYRDGGYSGGGGDRSLIHRSESFCGSRREFPKGFRSERDRSRREGSVSSWRRGLKDFDESGRGSRVSVEDRVVRSPKGLRDVKSPTWSKDSESEQSKKRSSSPRVLRDAKSKSKSPTWSKDSESEQSKSEQSKSVEVKKTEELQVQSGSSSEMEEGELEPEPLPPTEPQAAPKDAPIIASEDLPSVPLGTDDDKLVQNECHLKDIDTAMDEGQGLSSKEEVKSNEEVDSKVQDPEKEADKLPDVQDDTTEKMLVTETDRDTVSNGDDKKEECLDADTECKEETNKGDDAEEELFDEEERKEDKGLDLETSTDVGKPELNDEVSPENDVPKEVNREMMEESMANNAKDKGKGVSVAPTDTDVAHSSEDGLWIDRGSRDIATCSVDVIEGPSTRGFELFSRSPVRKVEKVDNAVLNKQKDDMGQLDLTLSLPNVLLPIGAHESGACETTTQAPGSPSQARSVQSLSNTFCTNSDGFTASMSFSGSQSFYHNPSCSLTKNSVDYEQSVGSRPLFQGIDQLSQGCWQGQSQSDPKQKEVPFGQKSLANGNGSFYQSPSWGVLDSQAVKGQHSRVLEGSSKMGCGLDRQLSFHKQLSGQSRRHDDVRSPSQSVGSHDIGSNYSFEKKREARDRNGGSLYRTTSQKEHEQLLMGGADFVETIIAKIVSEPVHTMSRKFHEMTGLSIVCLKEGIREIMLNQDKHGQILAFQKVLQNRSDITLDVLLKCHRVQLEILVALKTGLTHFLHLDNSMSSSELAQIFLNLRCKNISCRSQLPVDECDCKVCAQKNGFCRECMCLVCSKFDNASNTCSWVGCDVCLHWCHTDCGLRESYIRNGHSTTGSKGMTEMQFHCIACDHPSEMFGFVKEVFHNFAKEWSVETLCKELEYVKRIFSASKDMRGRQLHELAEQMLPRLANKSNHPEVLRHIMSFLSDGDSSKLAMTTNFSGKEQIKENNGVAGPSLEAAWMKSIYSEKPPLLERPANILPGYDQNDKRTHAQDLQMSSNQKDFCFDELESIVKIKQAEAKMFQSRADDARREAEGLKRIALAKNEKIEEEYTNRIAKLRLAETNETRKQKIEELQALDRAHLEYLNMKRRMEADIKDLLSKMEATKMSLTM* 1200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0629 1199 MobiDBLite consensus disorder prediction 1 451 - -
Apr5g0629 1199 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 759 781 IPR004082 -
Apr5g0629 1199 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 798 813 IPR004082 -
Apr5g0629 1199 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 813 828 IPR004082 -
Apr5g0629 1199 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 839 860 IPR004082 -
Apr5g0629 1199 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 885 905 IPR004082 -
Apr5g0629 1199 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 958 977 IPR004082 -
Apr5g0629 1199 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1094 1114 IPR004082 -
Apr5g0629 1199 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1133 1155 IPR004082 -
Apr5g0629 1199 MobiDBLite consensus disorder prediction 704 718 - -
Apr5g0629 1199 Coils Coil 367 387 - -
Apr5g0629 1199 MobiDBLite consensus disorder prediction 282 375 - -
Apr5g0629 1199 Coils Coil 1100 1138 - -
Apr5g0629 1199 MobiDBLite consensus disorder prediction 609 631 - -
Apr5g0629 1199 MobiDBLite consensus disorder prediction 1 16 - -
Apr5g0629 1199 MobiDBLite consensus disorder prediction 18 36 - -
Apr5g0629 1199 Pfam Coiled-coil region of Oberon 1072 1187 IPR032535 -
Apr5g0629 1199 MobiDBLite consensus disorder prediction 108 228 - -
Apr5g0629 1199 MobiDBLite consensus disorder prediction 386 433 - -
Apr5g0629 1199 Coils Coil 1176 1196 - -
Apr5g0629 1199 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 1 1198 IPR004082 -
Apr5g0629 1199 Coils Coil 1148 1168 - -
Apr5g0629 1199 CDD PHD_OBE1_like 878 937 - -
Apr5g0629 1199 Pfam PHD - plant homeodomain finger protein 848 971 IPR032881 -
Apr5g0629 1199 PANTHER PROTEIN OBERON 4 1 1198 - -
Apr5g0629 1199 MobiDBLite consensus disorder prediction 677 727 - -
Apr5g0629 1199 MobiDBLite consensus disorder prediction 50 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0629 Apr-Chr5 8673698 8679222 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0629 848 996 PHD Gene Family AT5G57380 26.846 2.34e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0629 - - gmx:100817003 1776.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0629 5 8673698 8679222 Apr5g0629 5 8673698 8679222 ECH