Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0616 ATGGGCAGAGCAAGTTGTTCTGTTCTTCTATCCTTTCTCATTCTTTCACTCCTTGTGGCTGAAATCCATGGAAACAAACAAGTTCAAGCTCTTAATAAACTACACAAGTCCAAGTTAAGGGGAAGTTCACAAATTGATAGGAGTGAGTTTGAGGTACAAGAGGTTGTTAATGATGAGATTGTTTATTCTCAAGAGGGCCTCAAAGAGAAAGATAGAATTGAGAGGCTTCCAGGACAACCCCTTGTGAATTTTGCTCAATATGGAGGGTATGTTACTGTGAATAAATTATATGGCCGTGCCTTTTATTATTACTTTGTTGAAGCACAACATTCTAAAGAAACACTACCACTTCTTCTTTGGCTCAATGGAGGTCCCGGATGTTCCTCTCTTGCTTATGGAGCAATGCAAGAACTTGGACCTTTCAGAGTAAACAGTGATGGCAAAACACTATACAAAAATAGATATTCATGGAACAATGTTGCAAATGTTCTGTTCCTGGAGTCACCTGTTGGAGTAGGGTTTTCTTATTCAAACAAATCTTCAGATTATGGTACCAATGGAGATAAGAAAACAGCAGCAGATAATTATTTATTTTTGGTGAATTGGTTGGAGAGATTTCCAGAATATAAGAACAGAGATTTCTATATTTCTGGAGAGAGCTATGCTGGCCATTATGTGCCTCAACTAGCACATACAATTCTCTACCATAACAAAATGGCAAATAAGGCAATCATCAACCTCAAAGGAATCTTGATTGGGAATGCAGTGATCAACGATGAAACTGACGCGCTAGGAATGTATGATTTTCTTGCTAGCCATGCCATCATCTCAGACCAAGCAGCTTATGATATCAACAAATCTTGTGATTACTCATCAAAGAATCAGACAAGTGAGTGCGATGCAGCTGAAAATGAAGTTGGGAATGATCTTGAATACATTGATTTATACAACATTTATGCTCCACTATGCAAGAACACCAATCTCACGGTCCTGCCCAAAAAGACCTCTATTGTCACTGATCCATGTAGTGAGTATTATGTGTATGCATATCTTAATAGAAAAGATGTTCAAGAGGCTCTCCATGCCAATGTTACCAACCTCAAATATGACTGGGAACCATGCAGCGATGTCATTACAAAGTGGGTTGATAGCTCTTCAACAGTTCTTCCACTTTTACATGAATTCCTCAACAATAGCCTCAGGGTTTGGATTTTCAGTGGTGACACAGATGGAAGGGTACCTATTACTTCAACCAAGTATTCGATTAACAAGATGAAGCTTCCCATTAAAACTGTTTGGCACCCTTGGTTTACCCGTGGAGAGGTTGGCGGCTATACACAAGTGTACAATGGAGACCTAACATTAGCTACAGTTAGGGAAGCAGGGCATCAAGTGCCAAGTTACCAACCGGCTGTGCAGCTGGAGGAGGAGTAA 1434 0.3989 MGRASCSVLLSFLILSLLVAEIHGNKQVQALNKLHKSKLRGSSQIDRSEFEVQEVVNDEIVYSQEGLKEKDRIERLPGQPLVNFAQYGGYVTVNKLYGRAFYYYFVEAQHSKETLPLLLWLNGGPGCSSLAYGAMQELGPFRVNSDGKTLYKNRYSWNNVANVLFLESPVGVGFSYSNKSSDYGTNGDKKTAADNYLFLVNWLERFPEYKNRDFYISGESYAGHYVPQLAHTILYHNKMANKAIINLKGILIGNAVINDETDALGMYDFLASHAIISDQAAYDINKSCDYSSKNQTSECDAAENEVGNDLEYIDLYNIYAPLCKNTNLTVLPKKTSIVTDPCSEYYVYAYLNRKDVQEALHANVTNLKYDWEPCSDVITKWVDSSSTVLPLLHEFLNNSLRVWIFSGDTDGRVPITSTKYSINKMKLPIKTVWHPWFTRGEVGGYTQVYNGDLTLATVREAGHQVPSYQPAVQLEEE* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0616 477 SUPERFAMILY alpha/beta-Hydrolases 70 474 IPR029058 -
Apr5g0616 477 Gene3D alpha/beta hydrolase 67 325 IPR029058 -
Apr5g0616 477 PRINTS Carboxypeptidase C serine protease (S10) family signature 153 165 IPR001563 GO:0004185|GO:0006508
Apr5g0616 477 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 176 IPR001563 GO:0004185|GO:0006508
Apr5g0616 477 PRINTS Carboxypeptidase C serine protease (S10) family signature 202 227 IPR001563 GO:0004185|GO:0006508
Apr5g0616 477 PRINTS Carboxypeptidase C serine protease (S10) family signature 453 466 IPR001563 GO:0004185|GO:0006508
Apr5g0616 477 Pfam Serine carboxypeptidase 78 474 IPR001563 GO:0004185|GO:0006508
Apr5g0616 477 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 10 474 IPR001563 GO:0004185|GO:0006508
Apr5g0616 477 PANTHER CARBOXYPEPTIDASE 10 474 - -
Apr5g0616 477 Gene3D - 388 475 - -
Apr5g0616 477 Gene3D - 342 379 - -
Apr5g0616 477 ProSitePatterns Serine carboxypeptidases, serine active site. 216 223 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0616 Apr-Chr5 8510188 8515178 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0616 378 471 Calmodulin-binding Proteins AT2G22960 33.010 4.64e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0616 K16297 - gmx:100783864 793.112