Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0610 ATGGGGTATCTCTCCCTCTCTTGCAGAGCTGAATCAGCCATCTCAACCTTCAATTCTTCGTCTCCTTCCAAACCAAGCAAAGAGAAAGAGAAAGAGAAGGAGAAACCCATCAAGATCCAAGAGTTTCACTACAGTGACCTTGAAGCTGCCACCAATGGCTTCTCTGACCGCAAGCTTCTGGGCAAGGGAAGCCATGGATATGTCTACAAAGCGGTGGTTGGTGGACGGCACGTGGCGGTGAAGAGGCCTTCAAGGCCTCACACGCTTCTTCACCGACCCATCTCATCTTCTGCACCAGAGATCACTAACGAGGTTGACAACGAGATCGATATCCTGTCAAAAATTCAGAGTCCAAGGTTGGTGAATTTGGTGGGTTTCACGAATGATTCAAAAGATAGGCTTTTGGTGGTGGAGTTCATGAGCAATGGTACCCTTTATGATGTTCTTCATTCTTCTCCAAGGCCTCCCAATTGGGGTAGGAGAATTCGTTTGGCTTTGCAAACTGCTAAGGCAATTGATACCCTTCATTCTTCAACCCCACCTGTGATTCACCGCGATATCAAATCTGCTAATGTTCTCATTGACCGTAGCTACAATGCAAGGTTGGGTGATTTTGGTTTGGCTTTGAGGGGTCATGTGGATGACTATAGACTCAGGTCTACTCCGCCTGCTGGCACTATGGGTTATCTTGATCCTTGTTATGTCACTCCTGATAATTTGAGTACTAAAACTGATGTTTTTAGCTTTGGGATTTTGTTGTTGGAGATTATAAGTGGAAGGAAGGCTATTGACATCACATATTCACCACCTTCTATTGTGGATTGGGCCATTCCTCTCATCAAGAAAGGGAAATTGTTGGCTGTTTATGATCCAAGAATCGCACCTCCTAAGGATCCGGTTGTGAGGAAGCAGTTGGCAGTGATTGCGGCTAAGTGTGTGAGGTCTTGTAGGGAGAGAAGGCCTTCTATGAAGGAGATTGTTACTTGGCTTTGTGGGTTGTGTAAGTTGGTGCCGCTTCATTCATGGAATGGTTTTAACAATCCTTGCATGATGGTTGAGACTGTGGGGCGCCCCGTTGAAGCAAGGAATGGTCAATTCAGTTCAAGGCTTGAAGGTGTGGAAGAAGGAAATTTTGAGGCTTTGGATGCAAGATTGTCTAAGTCTGCCATGAGATATTCTCGGAGGGTGTATTCTGATTTGGGGTTCAGTAGCAACTTGATGGACCTCATGGCTACCACTGAGGAGCCAGAATTTGTAAGAGATGCTGATGGTGTGGAACGTAGTTCTAAATCGGCTGAACAGGTTTCTAGCTCAAGGTTTGGCAGTGGAAGATATTTCAACAGAGGTAGAAATCTATACAGGCCTTGTGGTAGTGAGAAGGATGTGTTTGGCTTGAGTGAGGGCCAGATTGTAGGTGAGACTTCAAAGCAGGGTGGGGTTTCTGGTTCGAATTTGAACTTGAATTCTCTGGTTGCTGAGGTTATCTAA 1488 0.457 MGYLSLSCRAESAISTFNSSSPSKPSKEKEKEKEKPIKIQEFHYSDLEAATNGFSDRKLLGKGSHGYVYKAVVGGRHVAVKRPSRPHTLLHRPISSSAPEITNEVDNEIDILSKIQSPRLVNLVGFTNDSKDRLLVVEFMSNGTLYDVLHSSPRPPNWGRRIRLALQTAKAIDTLHSSTPPVIHRDIKSANVLIDRSYNARLGDFGLALRGHVDDYRLRSTPPAGTMGYLDPCYVTPDNLSTKTDVFSFGILLLEIISGRKAIDITYSPPSIVDWAIPLIKKGKLLAVYDPRIAPPKDPVVRKQLAVIAAKCVRSCRERRPSMKEIVTWLCGLCKLVPLHSWNGFNNPCMMVETVGRPVEARNGQFSSRLEGVEEGNFEALDARLSKSAMRYSRRVYSDLGFSSNLMDLMATTEEPEFVRDADGVERSSKSAEQVSSSRFGSGRYFNRGRNLYRPCGSEKDVFGLSEGQIVGETSKQGGVSGSNLNLNSLVAEVI* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0610 495 MobiDBLite consensus disorder prediction 15 35 - -
Apr5g0610 495 ProSitePatterns Protein kinases ATP-binding region signature. 60 81 IPR017441 GO:0005524
Apr5g0610 495 Gene3D Phosphorylase Kinase; domain 1 24 139 - -
Apr5g0610 495 SUPERFAMILY Protein kinase-like (PK-like) 32 330 IPR011009 -
Apr5g0610 495 Pfam Protein kinase domain 55 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0610 495 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN 1 476 - -
Apr5g0610 495 ProSiteProfiles Protein kinase domain profile. 54 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0610 495 Gene3D Transferase(Phosphotransferase) domain 1 140 338 - -
Apr5g0610 495 PANTHER OS01G0750732 PROTEIN 1 476 - -
Apr5g0610 495 ProSitePatterns Serine/Threonine protein kinases active-site signature. 182 194 IPR008271 GO:0004672|GO:0006468
Apr5g0610 495 SMART serkin_6 54 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0610 Apr-Chr5 8441848 8443891 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0610 32 330 Receptor kinase-like Gene Family AT3G59420 43.934 1.74e-74 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Apr5g0610 Pkinase 9.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0610 - - gmx:100819674 833.558