Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0595 ATGGGTCAAAGATTAGATAGGAAAGAGAAGATACGAGTGGCTCTCTATGTGCAAAAAGCAGCGTTGCATTTTATTAACGCTGGGAACCGAGGTGATTTCATGCTAACTAAGGAGACTCACGAAGCAGGCTTTGGAATTGAGCCAGATGAATTAGCATCCATTCTTCGAGCCCATGATGTTAAACGTTTAGAACTGCATGAAGGAGTTGAAGGAATAGCAAAATCTGTTCGTGTGTCATTGCAAGACGGTGTTAATTCACTCGATGTTCAGCATAGGCAAAACATCTATGGTGTTAACCGCCATGCAGAGAAGCCCTCCAGAAGTTTTTGGATGTTCGTTTGGGATGCAATGCAGGACTTAACTTTAATTATCCTTATGGGATGTTCTGTGATTTCAGTAGGTGTTGGAATCTCAACTGAAGGTTGGCCTAAAGGTATGTACGATGGAGTGGGAATCATACTATGTATTTTTTTAGTGGTCTTTGTCACTTCAGTCAGTGACTATAAACAGTCTTTGCAATTCAAGGATTTGGATAAAGAAAAGAAAAATGTGAGCATTCAGGTTACAAGAGAAGGTAGAAGACAAAAGGTTTCGATCCATGATCTAGTGGTAGGAGATATAGTACATCTGTCTATTGGAGACATTGTTCCTGCAGATGGGTTATTCATATCAGGTTTTGGCTTATTGATTGATGAATCAAGTCTATCAGGTGAGAGTGAGGCTGTGAATGTGGACCAAGGTAAGCCTTTTCTTTTATCCGGGACCACAGTACAAGATGGGTCTGCTAAGATGCTGGTGACATGCGTTGGCATGAGGACTGAATGGGGAAGATTGATGGATACTCTGAACGAAGGGGGAGATGATGAGACACCTCTTCAGGTCAAACTAAATGGGGTTGCGACCATAATTGGAAAGATAGGCTTGGTTTTTGCATTGCTGACATTCCTAGTTCTGACGAGCAGGTTTTTGTGGGCGAAAACAATTCATCATCAGATCACAGAGTGGTCCCTCGATGATGCATCTAAACTTCTCAATTTCTTTGCTACTGCTGTCATTATAATAGTTGTGGCAGTTCCCGAGGGGTTGCCTTTGGCGGTGACACTAAGCCTTGCATTTGCAATGAAGAAATTGATGGATGATAAGGCACTAGTTAGGCACCTCTCTGCATGTGAAACCATGGGTTCAGCTGGTTGTATTTGCACTGATAAAACGGGGACTTTGACAACAAATCACATGGTTGTGGACAAAATATGGATTTGCGAACAGACTAAAGTAATTAAAAGCGGCAGCAGTGAAAATGTTTTGAAGGGCTCAATTTCTGATCAGATACTTGATCTCCTTTTGCAGTCAATATTCCAGAATACTGGCTCAGAGATAGTCAAAGGGCAAGATGGAAAGAACAGAATAATGGGCACTCCCACAGAATCCGCATTGCTAGAATTTGGCTTGCTTCTGGGAGGTGATTCTAAGTTTTATAATGACAAGTATAGAATAGTAAAGGTTGAACCTTTCAATTCAGTCAGAAAAAAGATGTCAGTGCTTGTGGCTCTTCCCGGTGGCACCAACAAGTCTCGAGCATTTTGTAAAGGAGCATCAGAAATAGTTGTGAAAATGTGTAACAAAGTTGTTAATGCTGACGGCAATGTCGCCCATTTGAACGAACAACAAAGAAGTAGCATCACGGAAGTTATCAACGGTTTTGCCTCTGAGGCTCTGAGAACACTCTGCATTGCCTTCAGGGACATTAAAGGATCTTCTAAGGGTGATAGTATTCCTGAGGATATGTACACATTAATAGCCATTATTGGGATCAAGGATCCAGTGAGGCCTGGAGTGAAAGAAGCAGTTCAGACTTGTTTAGCAGCTGGGATTACTGTTAGAATGGTAACTGGTGACAACATAAATACGGCTAAAGCAATAGCTAGAGAATGCGGCATATTGACAGATGGAATCGCGATAGAGGGACCAGATTTCCGGAACAAGACCCAGCAAGAAATGGAGGAGATAATACCAAAAATACAGGTAATGGCTCGATCCTTGCCTCTGGATAAGCACACCTTAGTGACCCATTTGAGGAATGACTTTAATGAAGTAGTGGCAGTAACTGGTGATGGGACCAATGATGCTCCAGCGTTGCATGAGGCTGATATTGGACTTGCCATGGGTATTGCAGGGACAGAGGTTGCAAAAGAGAATGCAGATGTGATTGTAATGGATGATAACTTCACAACCATAGTGAATGTTACGAGATGGGGCCGTGCTGTTTATATTAATATACAAAAGTTTGTCCAGTTCCAGTTAACAGTCAATGTTGTAGCTCTCGCGCTGAATTTTGTTTCAGCATGCTTGTCAGGCTCTGCTCCTCTTACTGCGGTTCAAATGCTGTGGGTAAACATGATAATGGACACTCTGGGGGCATTGGCACTGGCTACAGAACCTCCCCATGATGGGCTGATGAAGAGGCCACCTATTGGAAAGAACGCCAAATTCATCACCAGGATCATGTGGAGAAACATAATTGGTCAGAGCATCTTCCAAATTATTGTCCTTCTGGTTCTCAAATTTCGTGGGAAACAGATTCTCAAGCTCGATGGACCTGATTCTACCACTGTTTTAAATACCGTCATATTCAACACCTTTGTTTTTTGCCAGGTATTCAACGAAATTAACAGCCGTGACATGGAGAAGATTAATGTTTTCCAAGGCTTGTTCAGAAGCTGGGTTTTCCTAATGGTCATGGCCTCAACAATATGCTTTCAAATCCTGATAGTTCAATTTCTGGGTACTTTTGCTCAAACAGTACCACTGAGCTGGGGATCGTGGATAACAAGCGTCATGATTGGTGCGGTAAGTTTACTTGTAGCTGTTGTCCTAAAATGCATTCCAGTTCCATCGAGCAGCTACGTGACCACGCCTCATGATGGTTACGAGCAGCTCCCCAGTGGACCAGAACTGGCATGA 2961 0.4272 MGQRLDRKEKIRVALYVQKAALHFINAGNRGDFMLTKETHEAGFGIEPDELASILRAHDVKRLELHEGVEGIAKSVRVSLQDGVNSLDVQHRQNIYGVNRHAEKPSRSFWMFVWDAMQDLTLIILMGCSVISVGVGISTEGWPKGMYDGVGIILCIFLVVFVTSVSDYKQSLQFKDLDKEKKNVSIQVTREGRRQKVSIHDLVVGDIVHLSIGDIVPADGLFISGFGLLIDESSLSGESEAVNVDQGKPFLLSGTTVQDGSAKMLVTCVGMRTEWGRLMDTLNEGGDDETPLQVKLNGVATIIGKIGLVFALLTFLVLTSRFLWAKTIHHQITEWSLDDASKLLNFFATAVIIIVVAVPEGLPLAVTLSLAFAMKKLMDDKALVRHLSACETMGSAGCICTDKTGTLTTNHMVVDKIWICEQTKVIKSGSSENVLKGSISDQILDLLLQSIFQNTGSEIVKGQDGKNRIMGTPTESALLEFGLLLGGDSKFYNDKYRIVKVEPFNSVRKKMSVLVALPGGTNKSRAFCKGASEIVVKMCNKVVNADGNVAHLNEQQRSSITEVINGFASEALRTLCIAFRDIKGSSKGDSIPEDMYTLIAIIGIKDPVRPGVKEAVQTCLAAGITVRMVTGDNINTAKAIARECGILTDGIAIEGPDFRNKTQQEMEEIIPKIQVMARSLPLDKHTLVTHLRNDFNEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIVMDDNFTTIVNVTRWGRAVYINIQKFVQFQLTVNVVALALNFVSACLSGSAPLTAVQMLWVNMIMDTLGALALATEPPHDGLMKRPPIGKNAKFITRIMWRNIIGQSIFQIIVLLVLKFRGKQILKLDGPDSTTVLNTVIFNTFVFCQVFNEINSRDMEKINVFQGLFRSWVFLMVMASTICFQILIVQFLGTFAQTVPLSWGSWITSVMIGAVSLLVAVVLKCIPVPSSSYVTTPHDGYEQLPSGPELA* 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0595 986 Pfam haloacid dehalogenase-like hydrolase 398 716 - -
Apr5g0595 986 SUPERFAMILY Calcium ATPase, transmembrane domain M 67 963 IPR023298 -
Apr5g0595 986 ProSitePatterns E1-E2 ATPases phosphorylation site. 402 408 IPR018303 -
Apr5g0595 986 Gene3D - 410 607 IPR023299 GO:0000166
Apr5g0595 986 PRINTS H+-transporting ATPase (proton pump) signature 560 578 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr5g0595 986 PRINTS H+-transporting ATPase (proton pump) signature 702 718 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr5g0595 986 PRINTS H+-transporting ATPase (proton pump) signature 734 759 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr5g0595 986 SUPERFAMILY HAD-like 399 807 IPR036412 -
Apr5g0595 986 PRINTS P-type cation-transporting ATPase superfamily signature 231 245 - -
Apr5g0595 986 PRINTS P-type cation-transporting ATPase superfamily signature 400 414 - -
Apr5g0595 986 PRINTS P-type cation-transporting ATPase superfamily signature 600 611 - -
Apr5g0595 986 PRINTS P-type cation-transporting ATPase superfamily signature 622 632 - -
Apr5g0595 986 PRINTS P-type cation-transporting ATPase superfamily signature 702 721 - -
Apr5g0595 986 PRINTS P-type cation-transporting ATPase superfamily signature 726 738 - -
Apr5g0595 986 CDD P-type_ATPase_Ca_PMCA-like 89 835 - -
Apr5g0595 986 Pfam Cation transporter/ATPase, N-terminus 67 132 IPR004014 -
Apr5g0595 986 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 57 963 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Apr5g0595 986 PANTHER CALCIUM-TRANSPORTING ATPASE 4 970 - -
Apr5g0595 986 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 667 789 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr5g0595 986 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 152 424 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr5g0595 986 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 497 648 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr5g0595 986 Pfam Cation transporting ATPase, C-terminus 787 960 IPR006068 -
Apr5g0595 986 SFLD p-type atpase 382 754 IPR044492 -
Apr5g0595 986 SUPERFAMILY Calcium ATPase, transduction domain A 185 281 IPR008250 -
Apr5g0595 986 Pfam E1-E2 ATPase 185 378 - -
Apr5g0595 986 Gene3D - 115 961 - -
Apr5g0595 986 Gene3D - 397 747 IPR023214 -
Apr5g0595 986 Gene3D - 83 283 - -
Apr5g0595 986 SFLD Haloacid Dehalogenase 382 754 - -
Apr5g0595 986 PANTHER CATION TRANSPORTING ATPASE 4 970 - -
Apr5g0595 986 SMART Cation_ATPase_N_a_2 63 137 IPR004014 -
Apr5g0595 986 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 406 612 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0595 Apr-Chr5 8079875 8093086 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0595 9 983 Primary Pumps ATPases AT3G57330 70.287 0.0 1407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0595 K01537 - gmx:100805063 1669.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0595 5 8079875 8093086 Apr5g0595 5 8079875 8093086 ECH