Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0592 ATGGCCAAGAAGAAGAGCTGGTTCAGTCTGGTGAAGAGGCTGTTTATATGGGATACACATTCAACACAAGAGAAGAAAACTTCATTCCAGAAGGAGAAAAGAAGGAAATGGATATTTGGGAGGCTAAAGACCAAGAGATTACCTTCAATTACAGCTCCACCACCATCAAAAGAAACAACCCTTAGTGAAGCAGAGGAAGAACAGAACAAGCATGCTTTAACTGTGGCTATTGCCTCAGCAGCAGCTGCTGAAGCTGCTGCTCAGGTTGCTGCTGAAGTTTTTCGACTCACTGGGGTCTCAGAATCTCAACCTGATAGAACTAGGAATGCTACTACTCCTCAATTCACATACCAATGCCAGATGGAGATCCAAGAATCTGCTTCAGCCATCAAAATTCAAACTGCATTTCGGGGTTACCTGGCAAGGAAGGCTCTGAGGGCATTGAAGGGAATAGTGAAGCTTCAAGCTATCATTCGTGGGAGAGCAGTGAGGCGCCAAGCTATGAGTACTCTCAAGTGTTTGCAGTCCATTGTAAGTATACAGTCACAGGTTTGTGCAAAGAGACTCCAAATGGTTGAAGGGAAATGGGATTGTGCTGAAAATGAAGTGATGCAAGATTCCAAAGACAAGATAATTAGGATGGACTCAAACAGTGAAAGAAAGTGGGATGACAGCACTTTATTGAAGGAAGAGGCAGATGCCTCTTGCATGAGCAAGAAAGAAGCAGTTCTCAAGAGAGAAAGAATAAAAGAATACTCATTTAGCCATAGAAGATCAGCAGAGACAGAAAGAAGTAAAGTAAATGGAAGATGGAGGTATTGGCTGGAGCAGTGGGTAGATACACAACTTTCAAAAAGCAAAGAACTTGAAGATTTAGACTCAGTTTTTAGTTCACATTCTAGAGGTGGGGAGGAATACGGAGGAAGACAACTTAGGCTGAGAAGTGATCCAAGACAAAATCCAGTTGAAGGGTTAGAATCTCCAATACTTGCTTCAAGATTAAGATCTTTTCCTCATAGGAGACAGTGTTCAGTGGGAGAAGACAACGCATTTTCAAGCTCTCCTGCAACTCCAGCATACATGGCTGCTACTGAATCAGCAAAAGCAAAAGCAAGATCAACAAGCTCTCCAAAATTAAGGACAGGGAGTTTGGACATGAACTCTGATACATATTCACCATGCAAGAAAAAGCTATCAATTGCATCGTCTATTAACAGTGATGTTCTTGGTAGTGGTAAAATGGGGAAGATCAGTGGTTGTAACCAGCAAAGATCTCCAAGCTTTAAGGGTCTTTCAATGCCTATAAAATCAAGCCGAACTATAAAGGATCTCAGTATTAATTCAGATTGCTCATTGCCTAATTGGGATCGAAGTAGTTCCTTCAAATGA 1389 0.4183 MAKKKSWFSLVKRLFIWDTHSTQEKKTSFQKEKRRKWIFGRLKTKRLPSITAPPPSKETTLSEAEEEQNKHALTVAIASAAAAEAAAQVAAEVFRLTGVSESQPDRTRNATTPQFTYQCQMEIQESASAIKIQTAFRGYLARKALRALKGIVKLQAIIRGRAVRRQAMSTLKCLQSIVSIQSQVCAKRLQMVEGKWDCAENEVMQDSKDKIIRMDSNSERKWDDSTLLKEEADASCMSKKEAVLKRERIKEYSFSHRRSAETERSKVNGRWRYWLEQWVDTQLSKSKELEDLDSVFSSHSRGGEEYGGRQLRLRSDPRQNPVEGLESPILASRLRSFPHRRQCSVGEDNAFSSSPATPAYMAATESAKAKARSTSSPKLRTGSLDMNSDTYSPCKKKLSIASSINSDVLGSGKMGKISGCNQQRSPSFKGLSMPIKSSRTIKDLSINSDCSLPNWDRSSSFK* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0592 462 PANTHER IQ-DOMAIN 11 5 448 - -
Apr5g0592 462 Pfam IQ calmodulin-binding motif 127 146 IPR000048 GO:0005515
Apr5g0592 462 MobiDBLite consensus disorder prediction 413 434 - -
Apr5g0592 462 SMART iq_5 124 146 IPR000048 GO:0005515
Apr5g0592 462 MobiDBLite consensus disorder prediction 416 434 - -
Apr5g0592 462 MobiDBLite consensus disorder prediction 362 388 - -
Apr5g0592 462 MobiDBLite consensus disorder prediction 368 388 - -
Apr5g0592 462 PANTHER IQ-DOMAIN 5-RELATED 5 448 - -
Apr5g0592 462 Gene3D - 124 177 - -
Apr5g0592 462 MobiDBLite consensus disorder prediction 296 324 - -
Apr5g0592 462 ProSiteProfiles IQ motif profile. 125 153 IPR000048 GO:0005515
Apr5g0592 462 ProSiteProfiles IQ motif profile. 149 176 IPR000048 GO:0005515
Apr5g0592 462 Pfam Protein of unknown function (DUF4005) 346 412 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0592 Apr-Chr5 8032958 8035717 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0592 1 462 IQD Protein Family AT5G13460 46.817 1.15e-119 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0592 - - gmx:100800192 714.916