Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0565 ATGGCACCTTCTTCTCCGAGTGTTGCTGATTCGCTGCATCCGTCAACAACACCCGAAGTCGTAGAGAATGATCTTCAGCCATTCTTCGTTCTTCATAAAGCTTCATCCCAAAGAAAAGATAGGACATCAACAGGACAGGGAAAATTGCGCAAGAGAAATGAGTTATCTTCATCATCACCACAAAGTGTAAAGAAACTGGAAGGAAGTATGACTGAAGAATGCGATGGCCATTTATTTCAGCAACTGCAGATTGGAGCTTTTGACAATGTTTGGACAAAAATTGAATCTACAATTGAGGATGTTTTAAGAGATCTCAATGCTAGTGTATTTAATGATATACAACAGTGGGTTCTGGAGTGCTACAACGCAACTAGATTGCTTGGAGAACCTACTATTGCTGAAGCAACTCGCTCTTTTCCTGTTCTAAATAATACTACTGTTGGGCAGCTGTTCACTGCATTAGTTATTACCAGAAACATAGAGTTCGTTGATGATATATTTACATTTGAAGAACTCAGCCATTTCTTGAAATCCCATGGATGCCATGTGGGTATGCTTTCATCAATGGAGTTTTCAATAAAAATTGGGATTGCTGGTTGCTTGAAAGCTTTATTGCATGAGTTTCTTGGCGGAGCTATCGATGTGGCTGATATATCAATCTTAGCATCGTGGTATAGAGAACAAGACAACTACAGTAAACCACTGGTGGTGATCATTAATGATTTGGAGAGATGTTGCGGATCAGTCTTAACTGATTTTATCCTGATGTTGAGTGAATGGGTTGTCAAGGTGCCAATCATCTTAATATTTGGAGTTGCAACAACGGTGGATACCCCAAGAAATATAATGCCATTTCATGCTCTTGAGCGGTTGTGCCCCTCTAGGTTCATGCTTGGAACACCAGCAGAGAGAATGGATGCAATTGTTGAGGCTGTTCTTGTCAAACATTGCACCACGTTCAGTATTGGTCATAAAGTGGCACTCTTCCTGAGAAATTACTTCATCAACCAGGATGGGACAGTAACATCTTTTATTAGAGCTTTGAAGGCAGCTTGCTTATTACATTTCTCTATGGAACCTCTGAGTCTCATACATGGGGGAACACTTGCTGAAGAACAGAGAGAGGGAAAATCTGCATTATCACCAGAGACTATTTTGAAATACATAGATGAACTTCCATCGTATGCAAGGAATCAAATGGTTGATCATCAGACTAAAAAGAGCGTGGCGAAAGGTTTGTCAGAGCTTATGACAGTGCAGAAGCGATGGAGCACTACCGTTCTCGTTTTCTGTGTTTCTTTTCCTTTTGATGTTGGTTATTTTTTTTCCTCTTGGTTATCCCCTTTTACGGTGGATGAGAATTGGGAAGTCTATTATGTTCGCCTTGCATTTAGCTATGCTGCGATACCTGTGAATTTCATCTTTGTTGACGTGGCTAAGTTGGAGTTCATGATCCTGATTTTTCCTTTGGTTCAGTGTCTATATGAAGCTGGAAAATATAGCAGAGTGCGATTGCTGGATTTGTTTTGTGAAGCTCTCAATCAAGATTTGTATCCGTTAAGGGATTCTGATTGTCATGTGGGGGATGAAAAAGATCGTGGTTTGTCCTCGACAAAGGATCCCTGTCAACAATACTCTATCATGCAAAACGGGGGTTTTATTTGCCAGATAGTACGCAAAGTGAGGGATCTCCCCACAGGAATGCTACATCAGTTGATTGAGAATTGGGGAAAACTTACTGCAGATATTTCAGAGATTCATGAGAAATTAAAAGCGTTGCAATCTTCAGTAATATGCGAAGATGGAAAGAGTTCCCGCAAGAGTTCCAAGGACATTTCCAAGTAACATTTTTACTCTCTCTTTTTTTTTAATTTATTTCCTTATTGGAGATATGCATCCAGTATTTCAGTAAACATCGACAAGGACGCAAGAATGTTAAATTCGCAAGCTATTGCATTTTTAGATTGTCTGGTTAGAGATTTTTTGAAGCCCATTGAAGGCATGCCTTTCCATGAAATTTTCTGCTTCAAGAATATTGAGAAGCTTCAATTGGTTTTAATTGGAGATCCAAGAAGAAGAATTCAAGTTGATCTGTTGGAGGTCCATAAGATTTTAAGGTGTGGTTGCTGTAGCAAGAGTGGCAGTGCCCTATTGCCATCGAGGCATGATTCCTCAATTATGTATTCTCTGGCTCAAGAGCATGGAGATCTTATCAATCTTCATGACTGGTTCGAGTCTTTTAGAACAATTGTTCTTCAACATAAAAATAAACGGAAACAAAAATCAAAGCAGTCCCCCCAACCAAAGAAGAGAAAAGATATAAACGGATCTGCAGACCAAAACGAAGCATCAATCCAAGCACGCTTTTGTAGGGCAGTTACAGAGCTGCAGATCACTGGACTGGTTAGAATGCCCAGCAAGAGGCGCCCTGATTTTGCTCAAAGAGTTGCATTTGGTCTTTGA 2463 0.4007 MAPSSPSVADSLHPSTTPEVVENDLQPFFVLHKASSQRKDRTSTGQGKLRKRNELSSSSPQSVKKLEGSMTEECDGHLFQQLQIGAFDNVWTKIESTIEDVLRDLNASVFNDIQQWVLECYNATRLLGEPTIAEATRSFPVLNNTTVGQLFTALVITRNIEFVDDIFTFEELSHFLKSHGCHVGMLSSMEFSIKIGIAGCLKALLHEFLGGAIDVADISILASWYREQDNYSKPLVVIINDLERCCGSVLTDFILMLSEWVVKVPIILIFGVATTVDTPRNIMPFHALERLCPSRFMLGTPAERMDAIVEAVLVKHCTTFSIGHKVALFLRNYFINQDGTVTSFIRALKAACLLHFSMEPLSLIHGGTLAEEQREGKSALSPETILKYIDELPSYARNQMVDHQTKKSVAKGLSELMTVQKRWSTTVLVFCVSFPFDVGYFFSSWLSPFTVDENWEVYYVRLAFSYAAIPVNFIFVDVAKLEFMILIFPLVQCLYEAGKYSRVRLLDLFCEALNQDLYPLRDSDCHVGDEKDRGLSSTKDPCQQYSIMQNGGFICQIVRKVRDLPTGMLHQLIENWGKLTADISEIHEKLKALQSSVICEDGKSSRKSSKDISK*HFYSLFFFNLFPYWRYASSISVNIDKDARMLNSQAIAFLDCLVRDFLKPIEGMPFHEIFCFKNIEKLQLVLIGDPRRRIQVDLLEVHKILRCGCCSKSGSALLPSRHDSSIMYSLAQEHGDLINLHDWFESFRTIVLQHKNKRKQKSKQSPQPKKRKDINGSADQNEASIQARFCRAVTELQITGLVRMPSKRRPDFAQRVAFGL* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0565 819 MobiDBLite consensus disorder prediction 1 67 - -
Apr5g0565 819 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 487 818 IPR020795 GO:0003677|GO:0005664|GO:0006260
Apr5g0565 819 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 69 207 IPR045667 -
Apr5g0565 819 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 231 363 IPR045667 -
Apr5g0565 819 Pfam Origin recognition complex winged helix C-terminal 690 817 IPR040855 -
Apr5g0565 819 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 487 818 - -
Apr5g0565 819 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 22 430 - -
Apr5g0565 819 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 22 430 IPR020795 GO:0003677|GO:0005664|GO:0006260
Apr5g0565 819 MobiDBLite consensus disorder prediction 1 22 - -
Apr5g0565 819 MobiDBLite consensus disorder prediction 49 66 - -
Apr5g0565 819 MobiDBLite consensus disorder prediction 34 48 - -
Apr5g0565 819 MobiDBLite consensus disorder prediction 754 779 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0565 490 786 Core DNA Replication Machinery Family AT5G16690 38.721 1.03e-55 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0565 K02605 - csin:114273166 755.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0565 5 7756052 7766121 Apr5g0565 5 7756052 7766121 ECH