Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0563 ATGAATAGCAGTGGTGGAGGGATGATGATGGGTTTCAGTAATAGTTATAGCAGGTCACCTTTCACAGTGTCTCAGTGGCAGGAACTGGAGCACCAAGCTTTGATCTTCAAGTACATGGTTGCGGGTCTTCCTGTGCCTCCTGATCTTGTGCTTCCCATTCAGAAGAGCTTCGACTCTATTTCACCGGGATTTTTTCACCATCCCACTTTGAGTTATTGTTCCTTTTATGGGAAGAAGGTGGACCCAGAGCCAGGACGATGCAGGAGGACTGATGGGAAAAAGTGGAGGTGCTCCAAGGAAGCCTACCCAGACTCCAAGTACTGCGAGCGCCACATGCACCGTGGCCGCAACCGTTCAAGAAAGCCTGTGGAATCACAAACTATGACACAGTCATCTTCAACTGTGACATCACTGACTGTCACTGGTGCCAGCAGTGGAACGGGAAGCTTCCAGAATCTTCCCACAAATGCCTTTGGTAATCTCCAGGGTACTGATTCTGGAACTGACCATTCCAATTATCACCTAGATTCCATTCCCTATGGGATTCCAAATAAAGAATACAGGTATCTTCAAGGACTTAAATCTGAGGGTGGTGAACATAGCATCTTTTCTGAAGCTTCAGGAAGCAACAAGGTTCTCCAAATGGAGTCACAGCTGGAAAGCACATGGCCCTTGATGTCAACAAGTATTGCCTCTTTCTCTACATCAAAATCAAGTAGTAATTCCATGTTGCAGAGTGATTATCCCCAGCATTCATTTTTATCCAGTGAATATGGGTCAGGAGAACATGTGAAGCAGGAGGGCCAGTCTCTTCGACCTTTCTTTAACGAATGGCCTAATAGCAGAGAGTCATGGTCTGGTCTGGAAGATGAGAGATCCAACCAAACAGCCTTCTCCACAACTCAACTCTCGATATCCATTCCTATGTCATCTTCTGACTTCTCTGCAACAAACTCTCAATCTCCACATGATAACTAA 978 0.4591 MNSSGGGMMMGFSNSYSRSPFTVSQWQELEHQALIFKYMVAGLPVPPDLVLPIQKSFDSISPGFFHHPTLSYCSFYGKKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVESQTMTQSSSTVTSLTVTGASSGTGSFQNLPTNAFGNLQGTDSGTDHSNYHLDSIPYGIPNKEYRYLQGLKSEGGEHSIFSEASGSNKVLQMESQLESTWPLMSTSIASFSTSKSSSNSMLQSDYPQHSFLSSEYGSGEHVKQEGQSLRPFFNEWPNSRESWSGLEDERSNQTAFSTTQLSISIPMSSSDFSATNSQSPHDN* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0563 325 MobiDBLite consensus disorder prediction 290 325 - -
Apr5g0563 325 SMART QLQ_2 19 55 IPR014978 GO:0005524|GO:0005634|GO:0006355
Apr5g0563 325 MobiDBLite consensus disorder prediction 112 172 - -
Apr5g0563 325 PANTHER GROWTH-REGULATING FACTOR 5 17 318 - -
Apr5g0563 325 PANTHER - 17 318 IPR031137 GO:0005634|GO:0006351|GO:0032502
Apr5g0563 325 ProSiteProfiles QLQ domain profile. 20 55 IPR014978 GO:0005524|GO:0005634|GO:0006355
Apr5g0563 325 ProSiteProfiles WRC domain profile. 81 125 IPR014977 -
Apr5g0563 325 MobiDBLite consensus disorder prediction 282 325 - -
Apr5g0563 325 Pfam QLQ 20 54 IPR014978 GO:0005524|GO:0005634|GO:0006355
Apr5g0563 325 MobiDBLite consensus disorder prediction 122 172 - -
Apr5g0563 325 Pfam WRC 82 124 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0563 Apr-Chr5 7731506 7736014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0563 9 124 GRF Transcription Factor Family AT3G13960 59.677 3.85e-47 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Apr5g0563 WRC 1.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0563 - - gmx:100787226 513.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0563 5 7731506 7736014 Apr5g0563 5 7731506 7736014 ECH