Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0557 ATGTCCAACACCTCACAAGTTATTACATGCAAAGCTGCTGTATGCTGGGGGATGGGAAAGCCTGTGATGGTGGAAGAGATACAAGTAGACCCTCCAAAAGCAACTGAAGTACGAGTCAAGATGCTTTGTGCCAGTATATGCTCCACTGACATAGCAAGCACACAAGGATTCCCACATACCAATTTTCCTCTAGCACTTGGACACGAAGGAGTTGGTGTTATAGAAAGCGTTGGGGATCAAGTGACAAATCTGAAAGAAGGGGATATGGTGATTCCCACATACATAGGCGAGTGCCAAGAATGTGAGAATTGTGTTTCGGAGAAAACCAATTTGTGTCTGACATACCCTGTGAGATGGACTGGTCTAATGCCAGATAACACTTCAAGGATGTCCATCAGAGGCCAGAGGGTATACCATGTTTTAAGTTGTGCAACATGGTCAGAGTACATGGTTATTGATGCCAACTACATTCTCAAAGTTGATTCAAGCATTGATCTAGCCCATGCCAGTTTCATCTCATGTGGGTTTTCTACTGGTTTTGGAGGTGCTTGGAAGGAAGCCAAGGTTGAAAGTGGATCAAGTGTAGCTGTTTTCGGTCTTGGGGCTGTTGGATTAGGGGCTGTAAGTGGAGCCAAAATGCAGGGAGCGACCAAGATAATTGGAATTGACAAAAATGAAATGAAGAGAGAAAAAGCAGAAGCTTTTGGAATAACTGACTTTATAAATCCCAGTGATTCTAATAAATCTATTTCAGAATTGGTCAAGGAACTAAGTGGTGGAAGAGGTGTGGACTATTCCCTTGAGTGCACTGGAGCTGCCCCTTTACTCACTGAATGCTTGGAAGCCACAAAAATTGGAACCGGTAAAACAATAGTAATTGGAACAGGAGTTGAACCTGTTTTGCCGTTGGGTCTTCTTACCATTCTGCTTGGTAGAACTTTGAAAGGTTCTGTTTTTGGAGGCCTAAAAACCATATCAGACCTTTCCTTTATAGCCAACAAATGCCAGAAAGAGGAATTCCCTCTTCAAGAACTCTTCACCCATGAGGTTACATTGGCAGATATAAACAATGCGTTTGAGCTATTGAAACAGCCCAATTGTGTCAAAGTTGTCATTAAAATGTCATATTAG 1131 0.4244 MSNTSQVITCKAAVCWGMGKPVMVEEIQVDPPKATEVRVKMLCASICSTDIASTQGFPHTNFPLALGHEGVGVIESVGDQVTNLKEGDMVIPTYIGECQECENCVSEKTNLCLTYPVRWTGLMPDNTSRMSIRGQRVYHVLSCATWSEYMVIDANYILKVDSSIDLAHASFISCGFSTGFGGAWKEAKVESGSSVAVFGLGAVGLGAVSGAKMQGATKIIGIDKNEMKREKAEAFGITDFINPSDSNKSISELVKELSGGRGVDYSLECTGAAPLLTECLEATKIGTGKTIVIGTGVEPVLPLGLLTILLGRTLKGSVFGGLKTISDLSFIANKCQKEEFPLQELFTHEVTLADINNAFELLKQPNCVKVVIKMSY* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0557 376 Gene3D - 179 317 - -
Apr5g0557 376 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Apr5g0557 376 PANTHER ALCOHOL DEHYDROGENASE 5 373 - -
Apr5g0557 376 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 164 333 IPR036291 -
Apr5g0557 376 SUPERFAMILY GroES-like 4 190 IPR011032 -
Apr5g0557 376 SMART PKS_ER_names_mod 17 372 IPR020843 GO:0016491
Apr5g0557 376 CDD liver_alcohol_DH_like 8 373 - -
Apr5g0557 376 Pfam Zinc-binding dehydrogenase 202 323 IPR013149 -
Apr5g0557 376 Pfam Alcohol dehydrogenase GroES-like domain 35 160 IPR013154 -
Apr5g0557 376 Gene3D - 14 369 - -
Apr5g0557 376 PANTHER ALCOHOL DEHYDROGENASE-RELATED 5 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0557 Apr-Chr5 7618031 7620345 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0557 35 366 Monolignol Biosynthesis Gene Families AT2G21730 27.434 2.68e-19 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0557 K00121 - gmx:100500200 609.757