Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0551 ATGGGAGGTGGAGGAGGTGCAGTTGGGGTGGGAGGTTTCAATGAAGAAGAAGGTGTTATGGGAGAAAAGGAAGAAGAAAACAAGTGGCCACCATGGCTGCAGCCACTTCTGAAGACAAGTTTCTTTGTTCAATGCAAAGTCCACGCGGATTCCCACAAGAGTGAATGCAATATGTATTGCTTGGACTGTATGAATGGAGCCCTTTGCTCAGCATGTCTGGCTTCCCACAAAGAACACAGAACAATTCAGATAAGGAGGTCTTCATACCATGATGTGATAAGGGTGTCTGAGATACAGAAATTTATGGACATAACAGGGGTCCAAACTTACATTATAAACAGTGCCAAGATCGTGTTCTTGAATGAAAGGCCTCAACCTAGGCCTGGAAAAGGGGTCACCAACACCTGCCAAGTCTGTGAGCGCAGCCTCCTTGATTCCTTCAGCTTCTGCTCTCTTGGTTGTAAGATTGTTGGAACCTCCAAGAAGTTCCGGAAGAAGAAAATGTTAGGTGAGACAGATGGGTCTGATGGTGAAGAATCAGTTAATGGCTTTAGCATTGGAAGTGCCAGAAACAAATTGCATAGCTTTACACCTTCAACACCACCACCAACAGTGGCGAATTACAGAACTGCCAAGAGAAGGAAAGGAATTCCACATAGATCTCCAATGGGGGGAGGGCTTATTATAGAATACTAA 696 0.4497 MGGGGGAVGVGGFNEEEGVMGEKEEENKWPPWLQPLLKTSFFVQCKVHADSHKSECNMYCLDCMNGALCSACLASHKEHRTIQIRRSSYHDVIRVSEIQKFMDITGVQTYIINSAKIVFLNERPQPRPGKGVTNTCQVCERSLLDSFSFCSLGCKIVGTSKKFRKKKMLGETDGSDGEESVNGFSIGSARNKLHSFTPSTPPPTVANYRTAKRRKGIPHRSPMGGGLIIEY* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0551 231 Pfam PLATZ transcription factor 85 156 IPR006734 -
Apr5g0551 231 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 18 226 - -
Apr5g0551 231 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 18 226 - -
Apr5g0551 231 MobiDBLite consensus disorder prediction 192 206 - -
Apr5g0551 231 MobiDBLite consensus disorder prediction 192 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0551 Apr-Chr5 7526012 7528376 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Apr5g0551 PLATZ 2.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0551 - - gmx:100810757 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0551 5 7526012 7528376 Apr7g0440 7 10506024 10507931 ECH
Apr5g0551 5 7526012 7528376 Apr5g0551 5 7526012 7528376 ECH