Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0542 ATGGCGACTCCCAATTCAACATGTCCACCACCAATGGAGGCCACGTCCAATGGAGCGTTTCAACATGAAAACCCCTTGGATTATGCACTTCCCCTTTTAATTGTTCAGATGTGTTTGGTTGTGATCTTCACCAGATTCCTTGCATTCCTTTGCCAACCTCTAAGACAACCCAGAGTTATTGCAGAGGTCATTGGAGGAATACTACTTGGACCATCAGCAATTGGAAGGAATGAGAAATTCCTGCATACAATATTTCCCAAGAGAAGCTTAACTGTGCTGGAAACAGTTGCCAATATTGGCCTCCTATTCTTCTTGTTTCTGGTGGGTCTAGAGCTTGACATGCGTTCTTTACGCAGAACTGGTCATAAGGCATTGGGTATTGCCATTGCTGGAATCACATTCCCTTTTGTTCTTGGCATTGGCACATCATTTGCTCTTCGAGCCACCATATCCAAAAATGTTGATTCAGCCTCATTCCTTGTCTTCATGGGTGTTGCTCTCTCAATCACTGCTTTTCCCGTCCTTGCTCGTATCTTAGCTGAGCTCAAACTCCTCACAACTGATGTTGGTCGCATAGCAATGTCTGCAGCTGCTGTTAATGATGTTGCTGCATGGATACTACTTGCTCTTGCTATAGCTCTATCAGGCTCTGAGACAACACCTATAGTTTCTTTATGGGTCTTGCTTTGTGGTCTCGCTTTTGTCCTCTTTGCTATCTTTGTCATAAAGCCCTTGCTTGCAATGATGGCTAATCGTTCACCTGAGGGTGAACCAGTGCAGGAGATTTTCATATGCATCACCTTGACAGTAGTCTTGGCTTGCAGTTTTGTCACTGATACTATTGGCATTCATGCACTCTTTGGTGCTTTTGCAGTTGGCATAGTTATGCCCAAAGATGGTCCCTTTGCCGGGGTTTTGATCGAGAAGATAGAGGACCTCGTAATGAGCCTTTTCTTGCCACTCTATTTTGTGTCAAGTGGTTTGAAGACTAATGTTGCAACCATAAGTGGTGCACTTTCTTGGGGATTACTTGCCCTTGTTATATTCACTGCTTGCTTTGGAAAGATCATTGGCACATTCGTTGTGTCAATGTTATGTAAGGTGCCTTTTAGAGAATCCTTGGCCCTTGGATTTCTCATGAACACAAAGGGCTTGGTGGAGCTCATTGTCCTTAACATTGGCAAGGATCGAAAGGTACTGAACGACCAAGCATTTGCAATTTGTGTTGTGATGGCACTGGTCACCACTTTCATTACCACTCCAATAGTGATGGCAGTGTATAAACCAGCTCGTAGGGGATCACCTTACAAGCATAAAACAGTTCAGCGCAATGATCCTGACTCGGAGCTTCGGGTGCTAGCATGCTTCCACAGTACACGCAGCATTACTACCTTGATCAATCTAATAGAGTCATCACGGGGAACCCGAAAACGAGGAAAGCTTTGTGTGTATGCCATGCACTTGATGGAACTATCAGAGCGACCTTCAGCCATCACAATGGTTCACACGGCACGTAACAATGGCATGCCATTTTGGAACAAAAAATATAACAATAGAGATCAAGTGGTCATTGCATTTCAGGCTTATGGTCATCTAAGTAGTGTCAATGTTCGTCCCATGACTGCCATATCAGCTTTCAACAACATTCATGAAGACATTTGTACTAGTGCACACCAAAAGCGGGTAGCAATCATTCTCCTCCCTTTCCACAAACACCAACGTGTTGATGGGTCTATGGAGTCATTGGGAAACTCATTACATGTAATGAATGGTCTTGTGCTTACCCATGCTTCTTGTTCTGTGGCAATTTTGGTTGATCGTGGGCTTGGAGGGACAACCCAAGTCCAAGCTAGTGAAGTGTACTTCAATGTTGCTGTGGCCTTCTTTGGAGGGAGTGATGACCGTGAAGCACTTGCCTATGGAATGAGAATGGCCGAACATCCTGGGATTTTGCTAAGTGTTGTTAAGTTTATTGCTCCATCTGGGATGACGTTGGCTTTTGGAGCCAAATTGGTTGGTGTAACAGCCAACAACGACAAGAAATTAATAAATGTGGGTGTGGCTGGTGACACTACCCAAGATGAAGATAAACAAGAGGATGAAAAATTTTGGTCTGTGTTCTTAAGTGCATGCTGCAAGAGTGGAGGGTCAATAATATATGAGGATAGGTTGGTGGAAAGCAGAGAAGATGTTGTATCTGTATTGAGTGAAAGGACTAGGAGCAATCTTATTTTGGTAGGTAGAATGCCACCAGTGGCACCTTTGATAGACATAAGTGATTGTCCAGAGCTTGGTCCTGTTGGAAGCTACTTGGCTTCTTCTGAGTTTTCCACTTCTGCATCAGTTTTAGTATTTCAACAATACAATCCCAAAACGGACAAATACCCATTGGTTATGGAGATTTCTGATTACTCAAATATGCCAGACACGCCCATGAATTCTCCATAG 2448 0.4379 MATPNSTCPPPMEATSNGAFQHENPLDYALPLLIVQMCLVVIFTRFLAFLCQPLRQPRVIAEVIGGILLGPSAIGRNEKFLHTIFPKRSLTVLETVANIGLLFFLFLVGLELDMRSLRRTGHKALGIAIAGITFPFVLGIGTSFALRATISKNVDSASFLVFMGVALSITAFPVLARILAELKLLTTDVGRIAMSAAAVNDVAAWILLALAIALSGSETTPIVSLWVLLCGLAFVLFAIFVIKPLLAMMANRSPEGEPVQEIFICITLTVVLACSFVTDTIGIHALFGAFAVGIVMPKDGPFAGVLIEKIEDLVMSLFLPLYFVSSGLKTNVATISGALSWGLLALVIFTACFGKIIGTFVVSMLCKVPFRESLALGFLMNTKGLVELIVLNIGKDRKVLNDQAFAICVVMALVTTFITTPIVMAVYKPARRGSPYKHKTVQRNDPDSELRVLACFHSTRSITTLINLIESSRGTRKRGKLCVYAMHLMELSERPSAITMVHTARNNGMPFWNKKYNNRDQVVIAFQAYGHLSSVNVRPMTAISAFNNIHEDICTSAHQKRVAIILLPFHKHQRVDGSMESLGNSLHVMNGLVLTHASCSVAILVDRGLGGTTQVQASEVYFNVAVAFFGGSDDREALAYGMRMAEHPGILLSVVKFIAPSGMTLAFGAKLVGVTANNDKKLINVGVAGDTTQDEDKQEDEKFWSVFLSACCKSGGSIIYEDRLVESREDVVSVLSERTRSNLILVGRMPPVAPLIDISDCPELGPVGSYLASSEFSTSASVLVFQQYNPKTDKYPLVMEISDYSNMPDTPMNSP* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0542 815 PANTHER CATION/H+ EXCHANGER 3 1 814 - -
Apr5g0542 815 PANTHER CATION/H + ANTIPORTER 1 814 - -
Apr5g0542 815 Pfam Sodium/hydrogen exchanger family 40 422 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Apr5g0542 815 Gene3D - 32 434 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0542 Apr-Chr5 7415521 7418368 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0542 1 806 Antiporter Super Family AT3G17630 67.574 0.0 1077
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0542 - - gmx:100818975 1345.49