Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0529 ATGGCTTACATGTGTGCGGACAGTGGGAACCTGATGGCCATTGCCCAGCAAGTGATAAAGCAGAAGCAGCAGCAGGAGCAAGAGCAGAAGCAGCAGCAGCAGCAGCAGCAACAACAACAGCAGCAGCAGCAGCAGCACCCGCTCTCCCTTCTCCAGCCATGGCCTCCCACCGACTTCACCGACCCCTTCCAAGTGCCCGATCCGGGATTCCACTTCCCTCCACTGGACCCTCATTCCGCCGCCTTCAGATTCTCCGATTTCGACTCCGACGAGTGGATGGATACCCTAATTGACACGCCCCCCGATTTCTCCCTCTACCCCTTCCCCTTCCAACCCACTCCACCCCCTTCTCCCTCTCCGCCTAATCAAAACGACGCCGTCTCGTCGCCACCTCTCCTGAAAGCCCTCTCCGACTGCGCACGGCTCTCCCTCAGCCACCCCCATCAAGCCGCCGAGTCCCTCTCCCGTTTATCGAACTCCATTTCCCAACACGGTAACCCCACTCAGAGACTCGCTTTCTACTTCTCCCAGGCCCTCTCCGCCAGAATCTCCTCTCCCAAACACAAACCTCCTTCTCCAACTCCTTCTCCCACTTCCCCTGAAGACTTCACCCTCTCTTACAAAACCCTTAACGACGCTTGCCCCTATTCCAAGTTCTCCCATTTAACTGCCAACCAAGCCATCCTCGAAGCCACCGAAGGTTCCTCCCACATTCACATCGTCGATTTCGGCATCGTTCAAGGCATTCAGTGGCCTCCTCTTTTGCAAGCCTTCGCCACTCGCTCCTCTGGCAAACCTCTTTCCATTAGGATCTCCGCCATACCCGCCATCGCTCTCGGAACCTCCCCTGCTCCTTCTCTCTCCGCCACTGCCAACCGTCTCTCCGATTTCGCCAAACTTCTCCACTTGAATTTCCAATTCACCCCTGTTCTCACTCCTATTCATCAACTCAACCACTCTAGCTTCTCCATTCAACCCAACGAGGCCCTCGCTGTTAACTTCATGCTTCAGCTGTATAACCTCTTGGATGACACCCCAACTGCGGTTGAAACTGCGCTCAGGTTGGCCAAGTCTTTGAACCCCAAGATCGTTACTCTTGGCGAGTATGAAGCTAGCCTTACACGTGTTGGCTTCCTCACGCGCTTCAACACTGCATTGAGCTATTTCTCTGCTCTTTTTGAGTCTCTGGAGCCTAACTTGCCCTCTGATTCGCCCGACCGGTTCCAGGTCGAGAGTCTTCTGCTCGGACGCCGGATCACTGCCGTCGTTGGCCCTGACTCGCCGGGAGAAAGGATGGAGGACAAGGAGCAGTGGAGGGTGCTGATGGAAAGTTGTGGTTTTCAATCGGTTGAAGACTTGACTAGGCAAAAGGTGATCAAGGGAATAGAATGGAATTAG 1398 0.5494 MAYMCADSGNLMAIAQQVIKQKQQQEQEQKQQQQQQQQQQQQQQQHPLSLLQPWPPTDFTDPFQVPDPGFHFPPLDPHSAAFRFSDFDSDEWMDTLIDTPPDFSLYPFPFQPTPPPSPSPPNQNDAVSSPPLLKALSDCARLSLSHPHQAAESLSRLSNSISQHGNPTQRLAFYFSQALSARISSPKHKPPSPTPSPTSPEDFTLSYKTLNDACPYSKFSHLTANQAILEATEGSSHIHIVDFGIVQGIQWPPLLQAFATRSSGKPLSIRISAIPAIALGTSPAPSLSATANRLSDFAKLLHLNFQFTPVLTPIHQLNHSSFSIQPNEALAVNFMLQLYNLLDDTPTAVETALRLAKSLNPKIVTLGEYEASLTRVGFLTRFNTALSYFSALFESLEPNLPSDSPDRFQVESLLLGRRITAVVGPDSPGERMEDKEQWRVLMESCGFQSVEDLTRQKVIKGIEWN* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0529 465 Coils Coil 12 45 - -
Apr5g0529 465 MobiDBLite consensus disorder prediction 183 204 - -
Apr5g0529 465 MobiDBLite consensus disorder prediction 105 125 - -
Apr5g0529 465 MobiDBLite consensus disorder prediction 18 72 - -
Apr5g0529 465 MobiDBLite consensus disorder prediction 18 51 - -
Apr5g0529 465 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 133 454 IPR005202 -
Apr5g0529 465 PANTHER SCARECROW-LIKE PROTEIN 4-RELATED 133 454 - -
Apr5g0529 465 MobiDBLite consensus disorder prediction 103 130 - -
Apr5g0529 465 Pfam GRAS domain family 133 451 IPR005202 -
Apr5g0529 465 ProSiteProfiles GRAS family profile. 123 465 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0529 Apr-Chr5 6198179 6201574 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0529 1 451 GRAS Transcription Factor Family AT5G66770 53.125 1.22e-163 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Apr5g0529 GRAS 8.8e-94 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0529 - - aprc:113865332 796.964