Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0515 ATGGAAGAAGCAACTTTCTGGTCGATTCTGATCATAACTAGTTCAATTTTTCTCCTCTCCTTTTTCAATCTTTTGAATTCCATACTTAAAAAACAAGCCAACCATAAAAACCTTCCACCTAGTCCACCACCTTTACCCCTCATAGGTCATCTCCACCTCATAAAAGAACCATTACACCGAAGTCTACATAACCTCACCCACAAATATGGCCACATCATGTTTCTCAAACTTGGGACACGCAATGTCCTCGTTGTCTCATCACCTTCAGCAGTAGAAGAATGCTTCACAAAAAACGACATCACTTTTGCAAACCGTCCCCAAACACTTGCCGCTAAGCATCTCAATTACAATAGCAAGACTGTGGGGTTTGCTTCCTATGGTGACTACTGGCGCAACCTTCGCCGTCTAACAACAGTGGAGCTTTTCTCTACCCATCGCCTTGCCATGCTCACAAGGGTTCGAGAAGAAGAGGTTGAATTGTTGGTTAAGCAAATATTTGAAGAGTGCAAAGGGCAAGAAATGTCAAAGGTTGACCTCAAGTCAAAGTTTGTGGAGCTTTCTTTCAATATGATGCTGAGGATGATATCTGGGAAACGGTACTATGGTAAGCATGAAGTTGCACAAGAAGGGAAGGAATTTCAGAGTCTGATGAAGGAGTTTGCGGAGCTTATGGGAAACGGAAATTTGAATGATTTCTTTCCGGTATTGCAATGGGTTGATTTTCAAGGGGTAGAAAAGAAGATGGTGAAGCTGATGGAGAAGCTGGACAGGTTCTTGCAGAAGCTCCTTGATGAACAACGGAGAAACAGACACGTGGATGAAGGAAACCCACAAGGGAATGTGACGCTGATTGGTGTCATGTTGGACTTGCAACAAACGGAGCCACAATTCTACACGCATGAAACCGTGAAAGCTGTTATCCTGACGATTCTTGTAGCTGGTTCAGAAACTGCGGCCACTTCCATGGAATGGGCATTCTCTCTTCTCCTTAACCATCCAGAAACAATGAACAAGGTTAAGGTTGAGATAGACAGTTATGTAGGACATGATCAACTGTTGAATGAATCGGACACAACAAGACTAAAATACTTGCAAAATGCAATTACGGAGACACTACGTTTATATCCTGCGGTTCCTCTTCTTCTGCCCCACGAATCCTCAATTGATTGCAATGTTTGTGGTTTTGATATTCCACGAGGGACGATGCTACTTGTGAATCTATGGACTTTGCATAGGGACGTTAACTTGTGGGTTGATCCAACAAGGTTTATGCCAGAAAGATTTGATGAAGGGGAACAAGGTGGTCATGTTTATGATATGATTCCATTTGGTATTGGAAGACGAGCTTGCCCAGGAGTTGTTTTGGCCAAACGTTTTATGGGACATGCATTAGGAGCCTTGATTCAGTGTTTTGAGTGGGAAAGAATTGGGCATCAAGAAATCGACATGACAGAAGGAATAGGACTTACGTTGCCTAAAGTTGAACCTTTGGTTGCCTTATGCCGACCCCGCCAAGCTATTATCAAGGTTTTGTCTAATATATAA 1545 0.4278 MEEATFWSILIITSSIFLLSFFNLLNSILKKQANHKNLPPSPPPLPLIGHLHLIKEPLHRSLHNLTHKYGHIMFLKLGTRNVLVVSSPSAVEECFTKNDITFANRPQTLAAKHLNYNSKTVGFASYGDYWRNLRRLTTVELFSTHRLAMLTRVREEEVELLVKQIFEECKGQEMSKVDLKSKFVELSFNMMLRMISGKRYYGKHEVAQEGKEFQSLMKEFAELMGNGNLNDFFPVLQWVDFQGVEKKMVKLMEKLDRFLQKLLDEQRRNRHVDEGNPQGNVTLIGVMLDLQQTEPQFYTHETVKAVILTILVAGSETAATSMEWAFSLLLNHPETMNKVKVEIDSYVGHDQLLNESDTTRLKYLQNAITETLRLYPAVPLLLPHESSIDCNVCGFDIPRGTMLLVNLWTLHRDVNLWVDPTRFMPERFDEGEQGGHVYDMIPFGIGRRACPGVVLAKRFMGHALGALIQCFEWERIGHQEIDMTEGIGLTLPKVEPLVALCRPRQAIIKVLSNI* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0515 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Apr5g0515 514 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0515 514 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0515 514 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0515 514 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0515 514 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0515 514 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0515 514 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0515 514 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0515 514 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0515 514 Coils Coil 241 268 - -
Apr5g0515 514 PANTHER CYTOCHROME P450 82C3-RELATED 17 513 - -
Apr5g0515 514 SUPERFAMILY Cytochrome P450 39 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0515 514 Gene3D Cytochrome P450 28 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0515 514 PANTHER CYTOCHROME P450 FAMILY PROTEIN 17 513 - -
Apr5g0515 514 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0515 514 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0515 514 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0515 514 Pfam Cytochrome P450 39 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0515 Apr-Chr5 5999294 6001963 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0515 14 511 Cytochrome P450 AT4G37320 47.525 7.16e-168 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0515 - - gmx:100794610 761.14