Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0502 ATGTATCTTGTGTGGGAAGATTTAACTGTTGTAGTTCCAAATTTTGGGAATGGACACACTAGGAGATTGCTTAATGGGTTGAATGGATTTGCTGAACCTAACAGGATCATGGCTATCATGGGTCCTTCTGGCTCTGGAAAATCTACGCTTCTTGATGCTTTAGCAGGTAGACTCTCTAGAAACGTGATCATGTCTGGAAATGTGCTTTTAAATGGAAAGAAGAGGAGATTAGATTACGGGGTTGTAGCTTATGTGACCCAAGAAGACATAATGTTGGGAACACTAACAGTTAGAGAGACAATATCTTACTCAGCTAATCTAAGGCTTCCATGTACAATGACCAAAGAAGAGGTAAATGACATTGTAGAGGGAACAATTATGGAAATGGGTCTTCAAGATTGTGCTGATCGGCTTATAGGGAATTGGCATTTGAGAGGTATAAGTGGTGGAGAAAAGAAAAGACTAAGCATAGCAGTTGAAATTCTAACAAGGCCTTGCCTCTTGTTCCTTGATGAACCCACAAGTGGTCTTGATAGTGCCTCAGCATATTTTGTAGCCCAAACTTTGAGGAACATAGCACATGATGGGAAGACTGTTATATCTTCTATACATCAACCAAGTAGTGAGGTTTTTGCACTCTTTGATGATCTCTTTCTGCTTTCTGGGGGCCAAACAATCTACTTTGGAACAGCCGAAAAGGCAGTTGAGTTCTTTGCGAGAGCAGGATTCCCATGTCCAAGTAGAAGGAACCCTTCAGATCATTTCCTCCGTTGCATTAATTCAGACTTTGATGCGATCACAACCACTGTGATGGCCACCCAAAGAATACATGTATATATGCCTAACAATTTGTTTTTTCAATACCACAGGTTTTATAGAATATCAGTAACGGGATCGCCAACGGACTTATCAACTGCAGCAGTCAAAGCAAAACTCATAGAGAAATACCGATGGTCAGAGCATGCAACCATTGCAAGAGAAAGAATAAAAGAAATCTCAAACATTGTAGGACATGATTTTGAAAGTAAAACCAAATGCGAAGCCAAATGGTGGAAGCAACTATCAACACTGACTCATAGATCTTTCGTGAACATGTCAAGAGATGTGGGATATTACTGGATAAGGATAACAATCTATGTGGCCTTATCTTTGTGCGTTGGAACAATCTTCTTTGAAATTGGATCAAGTTATAGAGCCATTTTCGCTAGAGGAGCATGTGGCGCTTTTATATCAGGTTTCATGACATTCATGTCCATAGGAGGCTTCCCATCTTTCATAGAAGAAATGAGGGTCTTTTACAAAGAAAGGCTCAATGGGTATTATGGGGTTGCAGTCTACATTCTATCAAATTTTCTCTCTTCATTTCCCTTTGTGGCAGTCATGTCCATTGCTACGGGAACTATAACCTATTATATGGTTAAGTTTCGTCCAGAATTTTCACATCTTTTGTATATCTGTCTTGATCTTATTGGTTGCATTGCGGTTGTGGAGAGTTCTATGATGATAATAGCTTCACTGGTTCCCAACTTCCTCATGGGATTGATAATTGGAGCGGGATATATTGGTGTTATGATGATGACAGCTGGCTATTTCCGTCAGATCCCTGATCTTCCCAAATTCTTCTGGCGTTACCCAATTTCATACATCAATTATGGTGCATGGGGATTGCAGGGAGCTTACAAGAATGACATGATTGGGATGGAGTTTGATTCTTCGGTACCTGGGGGCCCGAAACTGAAAGGAGAAATAATCCTCAAAACAATGCTTGGCATTCAAGTTGATAATTCAAAATGGTGGGACTTAGCTGCAGTGATGGTCATTCTCCTATCGCTTAGAGTTCTTTTCTTTTTCATTCTCAAATTTAAGGAGAGAGTTGCACCTTTCATTTATAGTATCTATGCCAAACAAACTCTTCAGCGTATCAAGAAGCGCCCTTCGTTCAGGAAAGCACCATCTTTCCCTTCCAAGCGGCACCAATCACTGCATCCGTTGTCTTCTCAAGAGGGTCTCAACTCCCCTATTCATTAG 2028 0.4058 MYLVWEDLTVVVPNFGNGHTRRLLNGLNGFAEPNRIMAIMGPSGSGKSTLLDALAGRLSRNVIMSGNVLLNGKKRRLDYGVVAYVTQEDIMLGTLTVRETISYSANLRLPCTMTKEEVNDIVEGTIMEMGLQDCADRLIGNWHLRGISGGEKKRLSIAVEILTRPCLLFLDEPTSGLDSASAYFVAQTLRNIAHDGKTVISSIHQPSSEVFALFDDLFLLSGGQTIYFGTAEKAVEFFARAGFPCPSRRNPSDHFLRCINSDFDAITTTVMATQRIHVYMPNNLFFQYHRFYRISVTGSPTDLSTAAVKAKLIEKYRWSEHATIARERIKEISNIVGHDFESKTKCEAKWWKQLSTLTHRSFVNMSRDVGYYWIRITIYVALSLCVGTIFFEIGSSYRAIFARGACGAFISGFMTFMSIGGFPSFIEEMRVFYKERLNGYYGVAVYILSNFLSSFPFVAVMSIATGTITYYMVKFRPEFSHLLYICLDLIGCIAVVESSMMIIASLVPNFLMGLIIGAGYIGVMMMTAGYFRQIPDLPKFFWRYPISYINYGAWGLQGAYKNDMIGMEFDSSVPGGPKLKGEIILKTMLGIQVDNSKWWDLAAVMVILLSLRVLFFFILKFKERVAPFIYSIYAKQTLQRIKKRPSFRKAPSFPSKRHQSLHPLSSQEGLNSPIH* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0502 675 Gene3D - 1 242 IPR027417 -
Apr5g0502 675 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 3 247 IPR003439 GO:0005524
Apr5g0502 675 PANTHER ABC TRANSPORTER G FAMILY MEMBER 13 1 670 - -
Apr5g0502 675 CDD ABCG_EPDR 1 229 - -
Apr5g0502 675 MobiDBLite consensus disorder prediction 645 675 - -
Apr5g0502 675 MobiDBLite consensus disorder prediction 658 675 - -
Apr5g0502 675 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 670 - -
Apr5g0502 675 SMART AAA_5 33 232 IPR003593 -
Apr5g0502 675 Pfam ABC-2 type transporter 353 562 IPR013525 GO:0016020|GO:0140359
Apr5g0502 675 Pfam ABC transporter 27 175 IPR003439 GO:0005524
Apr5g0502 675 ProSitePatterns ABC transporters family signature. 147 161 IPR017871 GO:0005524
Apr5g0502 675 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 243 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0502 Apr-Chr5 5654569 5662844 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0502 22 218 Calmodulin-binding Proteins AT2G36910 29.493 6.42e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0502 K05681 - gmx:100806806 1202.96