Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0501 ATGGAGATAGAGGCAGCCAGTGATAACAACAAAGCCACCAACTGGGGTGCTTCTGAGAGGGAACTTGCTTACACTGGCTTTGATAGGGGAAGCTTCTTGGCTTGGGAAGATCTTAGAGTTGTTCTTCCAAACTTTGGAAAGGGACCAACCAAGAGGTTGCTTAATGGCCTTAATGGGTATGCTGAGCCTGGCAGAATCATGGCTATTATGGGTCCTTCTGGCTCTGGAAAATCCACCCTTCTTGATGCACTTGCAGGTAGACTCTCAAAAAATGTGGTTATGACAGGAAATGTTCTTCTCAATGGAAAGAAGAAAAGCCTAGGCTATGGTGCTGTTGCTTATGTAACACAAGAGGATGTGCTGCTGGGAACTCTCACTGTGAAGGAAACGATTTCTTATTCAGCTAATCTACGTCTTCCAACAACAATGACGAAAGAAGAAGTTGGTAGCATAGTGGATGGAACAATCATAGAAATGGGTCTCCAAGACTGTGCTGATAGGTTGATTGGTAATTGGCACTTGAGAGGTATAAGTGGAGGGGAAAAGAAGAGACTTAGTATTGCACTTGAGATCCTTACAAGGCCTCGCTTACTGTTTCTTGATGAACCCACAAGTGGCCTTGACAGTGCCTCTGCATTCTTTGTTGTTCAAACTCTTAGAAATGTTGCTCGTGATGGAAGGACAGTTATCTCTTCCATTCACCAACCCAGCAGTGAAGTATTTGCACTCTTTGATGACCTTTTCTTACTATCTGGTGGTGAAACAGTTTATTTTGGAGAAGCAAAAATGGCAGTTGAGTTTTTTGCTGAAGCTGGTTTTCCTTGTCCACGTAAAAGAAACCCTTCTGATCACTTCCTACGATGCATCAATTCTGACTTTGACATTGTGACAGCTACACTGAAGGGATCTCAAAGAATTCATGATATTCCAAATTCATCAGATCCTTTCTTGAATTTGGCCACAGCAGAGATTAAGGCAATGTTAGTTGAGAAATATAGGCGTTCAACGCATGCCAGAAAAGCCAAGAACAGAATTCAAGAACTGTCTACCGATGAAGGGCTTGAAACTGCAACACAACATGGAAGTCAAGCTAGTTGGTGGAAGCAACTCTTCACTTTGACAAGGAGATCGTTTGTGAACATGTGTAGAGATGTGGGTTACTACTGGTTGAGGATTATAATTTACATTATTGTATCAATATGTGTTGGAACCATTTATTTTGATATTGGCTATAGCTACACTTCAATCCTGGCCCGTGGTGCCTGTGGTGCATTCATATCAGGATTTATGACATTCATGTCAATTGGGGGATTTCCATCATTTATTGAAGAAATGAAGGTTTTTTATCGAGAGAGGCTTAACGGATATTATGGAGTTGCAGCATATATCTTAGCCAACTTCCTTTCTTCATTCCCATTCTTGGTTGCTATTGCTCTTACTACTAGCACCATCACTTATAACATGGTGAAATTCCGACCAGGAATCATTCACTTTGTGTTTTTCACTCTCAATATCTATAGCTGCATCTCCGTAATTGAGAGCCTCATGATGGTTGTAGCTTCACTAGTTCCAAATTTCCTCATGGGAATAATTACAGGAGCTGGAATAATAGGAATCATGATGATGACCTCCGGATTCTTCAGGTTGCTGTCTGATCTTCCAAAGCCCGTTTGGCGCTACCCAATTTCATACATCAGTTATGGCTCATGGGCAATACAGGGTTCATACAAGAATGACTTGCTTGGGCTTGAGTTTGATCCTATGATACCCGGTGACCAAAAATTGAGGGGAGAATACATCATCACACACATGCTAGGCATTGAATTAAACCACTCAAAGTGGTGGGATTTAGCAGCTCTATTTGTGATTCTCATATTCTACAGGGTTCTATTCTTTACTGTTCTGAAGCTTAAGGAAAGAGCATCCCCATTGTTTCAGACACTTTATGCCAAGAGAACCATACAACAGCTTGAGAAAAGACCCTCTTTCAGGAAGATGCCATCTTTTCCTTCCCAGAGGCATCAACCCCTCCATTCACTTTCTTCTCAAGATGGTCTTGATTCTCCACTCAACTAG 2076 0.4171 MEIEAASDNNKATNWGASERELAYTGFDRGSFLAWEDLRVVLPNFGKGPTKRLLNGLNGYAEPGRIMAIMGPSGSGKSTLLDALAGRLSKNVVMTGNVLLNGKKKSLGYGAVAYVTQEDVLLGTLTVKETISYSANLRLPTTMTKEEVGSIVDGTIIEMGLQDCADRLIGNWHLRGISGGEKKRLSIALEILTRPRLLFLDEPTSGLDSASAFFVVQTLRNVARDGRTVISSIHQPSSEVFALFDDLFLLSGGETVYFGEAKMAVEFFAEAGFPCPRKRNPSDHFLRCINSDFDIVTATLKGSQRIHDIPNSSDPFLNLATAEIKAMLVEKYRRSTHARKAKNRIQELSTDEGLETATQHGSQASWWKQLFTLTRRSFVNMCRDVGYYWLRIIIYIIVSICVGTIYFDIGYSYTSILARGACGAFISGFMTFMSIGGFPSFIEEMKVFYRERLNGYYGVAAYILANFLSSFPFLVAIALTTSTITYNMVKFRPGIIHFVFFTLNIYSCISVIESLMMVVASLVPNFLMGIITGAGIIGIMMMTSGFFRLLSDLPKPVWRYPISYISYGSWAIQGSYKNDLLGLEFDPMIPGDQKLRGEYIITHMLGIELNHSKWWDLAALFVILIFYRVLFFTVLKLKERASPLFQTLYAKRTIQQLEKRPSFRKMPSFPSQRHQPLHSLSSQDGLDSPLN* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0501 691 Pfam ABC-2 type transporter 369 578 IPR013525 GO:0016020|GO:0140359
Apr5g0501 691 PANTHER ABC TRANSPORTER G FAMILY MEMBER 13 30 686 - -
Apr5g0501 691 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 266 IPR027417 -
Apr5g0501 691 ProSitePatterns ABC transporters family signature. 177 191 IPR017871 GO:0005524
Apr5g0501 691 SMART AAA_5 63 234 IPR003593 -
Apr5g0501 691 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 30 686 - -
Apr5g0501 691 Pfam ABC-2 type transporter 234 290 IPR043926 GO:0140359
Apr5g0501 691 Pfam ABC transporter 54 205 IPR003439 GO:0005524
Apr5g0501 691 MobiDBLite consensus disorder prediction 668 691 - -
Apr5g0501 691 MobiDBLite consensus disorder prediction 659 691 - -
Apr5g0501 691 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 33 277 IPR003439 GO:0005524
Apr5g0501 691 CDD ABCG_EPDR 30 259 - -
Apr5g0501 691 Gene3D - 34 271 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0501 Apr-Chr5 5613738 5621240 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0501 49 246 Calmodulin-binding Proteins AT2G36910 29.665 5.17e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0501 K05681 - gmx:100807692 1262.28