Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0494 ATGGGCATGAAGGGCTGGTTTAGTATTCTGAAGAGGCTCTTCATATGGGACACAAATTCCACATCAGAGAAGGAGAAAAGAAGGAATTGGATGTTTGAGAGGGTTAAGAATAAGAGATTGCCATCAATTAAAGCCCCACCACCATCAAAGGAAACAATAGTAAGTGAAGCCGAGGAAGAACATAGCAAACATGCTTTAACAGTTGCTATTGCCTCAGCTGCTGCTGCAGAAGCTGCTATTACAGCAGCTCAGGTTGCTGTTCAGGTTGTTAGGCTCCAATCAGCTCACCAACATAATAAAGAAAATCAAGAAGAATTTAAACCTCTTAAAACTACGCATGATACTCCTCATTGCAAACAGCAATGGCAGAGGAAGATTGAAGATTCTTCAGCCATCAAAATTCAAACTGCATTTCGAGGTTACCTAGCAAGGAAAGCTTTGAGGGCATTGAAGGGAATAGTGAAGCTTCAAGCTATCATTCGTGGCAGAGCTGTGAGACGCCAAGCTATGAGTACCCTGAAGTGCTTGCAATCCATTGTAAGCATTCAGTCACAAATGTTTGCAAGGAGGCTACAAATGGTTGAAGGAAGGTGGGATTTTGGTGAGCATGAGGAGATGCAAGGTTCAAGAGACAAGATAATAAGGATGGACTCAAACAGTCAGAGAAGATGGGATGACAGCCTTTTGTTGAAGGAAGAAGTAGATGCCTCATGCATAAGCAAGAAAGAAGCAGCACTTAAGAGAGAAAGAATAAAAGATTACTCATTTAATCACAGAAGATCAGCTGAATCAGAAAGAAATAAAATAAATGGAAGATGGAGGTACTGGATGGAGCAGTGGGTAGACACCCATCTTTGTAAGAGTAAAGAACTTGAAGATTTAGACTCGGTTTTCAGCTCACATTATTCTAGAGATGGGGATGAATGTGGAAGAAGACAACTCAAACTTAGAAATATTCAGAGACAAAATCATGTTGAAGGGTTAGATTCTCCAATATTTACTTCAAGGAACTCTTTCCTTAAAGGGAGCCAAAACTCAGAGGGAGGAGAAGATCACTTATTACCAAGCTCTCCATCAATTCCCACATACATGGCTGCAACGAAATCAACACTTGCAAAAGCAAGATCAGCAAGCTCCCCAAAAGCAAGGACAGGAGGGAATTTTGACATGAACTCTGATAGTTATTCACCATGCAAGAAAAAGCTATCTACTATGGCTTCTGTTAACAGTGAAGTGCTTAGTAATGGTAGGATGGGAAAGCTCAGCTGTAATCAGCAAAGATCTCCTAGCTTGAAGGGCATTTCAAGACCCTTAAAATCAAGCCACACAGTGAGGGATCTCAGCATTAATTCAGATTGCTCAGTGCAAAATTGA 1374 0.4098 MGMKGWFSILKRLFIWDTNSTSEKEKRRNWMFERVKNKRLPSIKAPPPSKETIVSEAEEEHSKHALTVAIASAAAAEAAITAAQVAVQVVRLQSAHQHNKENQEEFKPLKTTHDTPHCKQQWQRKIEDSSAIKIQTAFRGYLARKALRALKGIVKLQAIIRGRAVRRQAMSTLKCLQSIVSIQSQMFARRLQMVEGRWDFGEHEEMQGSRDKIIRMDSNSQRRWDDSLLLKEEVDASCISKKEAALKRERIKDYSFNHRRSAESERNKINGRWRYWMEQWVDTHLCKSKELEDLDSVFSSHYSRDGDECGRRQLKLRNIQRQNHVEGLDSPIFTSRNSFLKGSQNSEGGEDHLLPSSPSIPTYMAATKSTLAKARSASSPKARTGGNFDMNSDSYSPCKKKLSTMASVNSEVLSNGRMGKLSCNQQRSPSLKGISRPLKSSHTVRDLSINSDCSVQN* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0494 457 ProSiteProfiles IQ motif profile. 151 178 IPR000048 GO:0005515
Apr5g0494 457 Pfam IQ calmodulin-binding motif 129 148 IPR000048 GO:0005515
Apr5g0494 457 MobiDBLite consensus disorder prediction 417 443 - -
Apr5g0494 457 Pfam Protein of unknown function (DUF4005) 343 432 IPR025064 -
Apr5g0494 457 Gene3D - 127 177 - -
Apr5g0494 457 SMART iq_5 126 148 IPR000048 GO:0005515
Apr5g0494 457 MobiDBLite consensus disorder prediction 371 394 - -
Apr5g0494 457 PANTHER IQ-DOMAIN 5-RELATED 2 451 - -
Apr5g0494 457 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 169 IPR027417 -
Apr5g0494 457 ProSiteProfiles IQ motif profile. 127 155 IPR000048 GO:0005515
Apr5g0494 457 MobiDBLite consensus disorder prediction 336 357 - -
Apr5g0494 457 MobiDBLite consensus disorder prediction 336 352 - -
Apr5g0494 457 PANTHER IQ-DOMAIN 11 2 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0494 Apr-Chr5 5101749 5105479 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0494 4 440 IQD Protein Family AT5G13460 44.079 3.02e-100 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0494 - - gmx:100794802 656.751