Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0445 ATGCTTCTGGACAAGAATGCCATTGAGGAAACCCATTATGAGGTTCTCAATGTCAAGGAAGATGCAAATTATGAAGAAATCCGTGCTAGTTACCGTGGTGCTATACTCAGTTTACATCCTGATAAGCTATTGAAGACAAGTGAAACATCCAGCAGTCCAACAGCTGGAGAGAGATTTCTTAAAGTACAAAAGGCATGGGAAATTCTGGGTAATTCGAGCTCCCGTTTATTTTATGATAATGAGCTGCAAAGTTCAAGGCGGGATGTCTCGGCTGCTGAAGTTGCAGAAGATTTGAGCTTACAGGATATGATAATTGAAAATGTTGGAGAAGCATTGGAACTGTTTTATCAGTGCCGATGCGGTGATTACTTCTCTGTAGACTCACTGGAATTGCTGAAAATGGGATATTCCGTATTGAGTGAGGAAAGTAGGATATCTATAGTCAATGTTGATACTTCACCAGGGTCAGTGATTCTTCCATGTGGATCTTGTTCGTTGAAAGCTCGGCTTGTAATCAATATGGATGACAATTGA 534 0.4064 MLLDKNAIEETHYEVLNVKEDANYEEIRASYRGAILSLHPDKLLKTSETSSSPTAGERFLKVQKAWEILGNSSSRLFYDNELQSSRRDVSAAEVAEDLSLQDMIIENVGEALELFYQCRCGDYFSVDSLELLKMGYSVLSEESRISIVNVDTSPGSVILPCGSCSLKARLVINMDDN* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0445 177 SMART dnaj_3 10 74 IPR001623 -
Apr5g0445 177 Pfam CSL zinc finger 97 171 IPR007872 -
Apr5g0445 177 PRINTS DnaJ domain signature 13 31 IPR001623 -
Apr5g0445 177 PRINTS DnaJ domain signature 31 46 IPR001623 -
Apr5g0445 177 PRINTS DnaJ domain signature 54 74 IPR001623 -
Apr5g0445 177 Pfam DnaJ domain 11 79 IPR001623 -
Apr5g0445 177 SUPERFAMILY CSL zinc finger 95 176 IPR036671 -
Apr5g0445 177 CDD DnaJ 11 71 IPR001623 -
Apr5g0445 177 Gene3D DnaJ domain 2 86 IPR036869 -
Apr5g0445 177 ProSiteProfiles dnaJ domain profile. 11 82 IPR001623 -
Apr5g0445 177 ProSiteProfiles DPH-type metal-binding (MB) domain profile. 94 173 IPR007872 -
Apr5g0445 177 PANTHER DPH3 HOMOLOG-RELATED 1 175 IPR044248 GO:0017183|GO:0046872
Apr5g0445 177 SUPERFAMILY Chaperone J-domain 10 82 IPR036869 -
Apr5g0445 177 Gene3D DPH Zinc finger 87 177 IPR036671 -
Apr5g0445 177 PANTHER DIPHTHAMIDE BIOSYNTHESIS PROTEIN 4 1 175 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0445 12 79 C2H2 Transcription Factor Family AT1G74250 38.235 2.23e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0445 K17867 - gmx:100814856 291.967