Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0422 ATGGAGAGATCCTCTGTGTTTGTTCTTGTCTCCGCGCTTTGTCTCTTACTGTCCCAACCTACCGGATCAGAAGACGACGATTCCCAAGCGCTTCTGGCACTCAAATCCTCCATAGACGTTCTCAACAAGCTTCCATGGCGTGCAGGAAGCGACGTGTGCACGTGGGTAGGTGTCAGAGACTGCTTCAACGGGAAAGTGAGGAAGCTAGTTCTGGAACACTCCAACCTAACCGGCACTTTGGAGGCAAAGATCTTGAACCGTTTGGATCAACTCCGAGTCCTCAGCTTCAAAGGAAACTCACTCTCCGGTCAAATCCCCGACCTCTCCGCCTTAGTCAACCTCAAATCAATATTCCTCAACGAGAACAACTTCTCCGGCGAGTTCCCCCCCTCCGTCTCCCTCCTCCACCGAGTCAAAGTCGTCGTTTTATCCGGGAACCAAATCTCCGGCGACATCCCGGCGTCCTTGCTCAAGCTCCGGCGCCTCTACATCCTCTACTTACAGGACAACATGTTCACCGGACACATCCCGGGTTTCAACCAAACCGGGCTCCGGTACCTGAACGTGTCGAACAACCGACTCTCCGGCGAGATTCCGGTGACCCCTGCATTGATCCGATTCAATGCGTCGTCGTTTGAGGGAAACCCAGGGCTGTGCGGAGAGCAGATCGAGCAACCATGCAGAAGCACGAGCATTGCGTTGCCACCATCGGTAAGCCCTAGTTATCCTCTGATTCCGGGGAAAGCGAAAACGTCGACGTCATCGAACCGCACGAAACTGATAAAGATAATCGGAGGGAGCGTTGGAGGGGCTGTTATGCTGTTTATATTATGCTTAGGTGTGGTGTGGGTGATTGGGAAGAAGCGGGGGAAGAGGGTGGGTTCTGGAACGAGGAGCAAGGGTGGTGACGTGGCGGAAGGTGAAGTTGTTGCGGTTGGAAGAGAAGAAGGTGGCGGTAGCAACGAGGGGAAAGATGGGGTTTTCGCGTGGGAGAGTGAGGGTGTAGGGAAGTTGGTGTTCTGCGGCGGAGGGGATCGGGAGATGAGTTACAGTTTGGAGGATTTGCTGAAGGCTTCGGCGGAGACATTGGGTAGGGGTATTATGGGAAGTACGTATAAGGCAGTGATGGAATCTGGGTTCATAGTTACTGTGAAGAGGTTGAAAGATGCTAGGTACCCTGCTTTAGAGGAGTTTAGGGCACACATTGAGGTGTTAGGGAGACTCAGACACCCTAACTTGGTCCCACTCAGAGCTTATTTTCAGGCCAAAGAGGAACGTCTTCTTGTTTATGATTATTTCCCCAATGGCAGCCTCTTCTCCCTCATTCACGGATCAAAAACATCTGGCGGGGGAAAGCCTCTTCACTGGACATCCTGCCTTAAAATCGCAGAAGATCTAGCAACTGGCCTTCTCTATATCCATCAGACCTCTGGCTTGACACATGGAAACCTTAAATCTTCCAATGTGTTGCTGGGTTCTGACTTTGAGTCCTGTCTTACTGATTATGGTCTCACAGTGTTCCTTAATCCTGACTCAATGGATGAGCCTAGTGCCACTTCTTTATTCTATAGAGCACCCGAATGCCGCAGCTTTCAAAGGTCACAAACCCAACCAGCTGATGTATACAGCTTTGGTGTCCTTCTTCTTGAGCTTTTGACTGGCAAAACACCCTTCCAAGACCTTGTTCAGACATATGGTTCAGATATTCCTAGGTGGGTTCGGTCGGTGCGCGAAGAAGAGACCGAGTCTGGGGATGAACCTTCCTCAGGCAATGAAGCATCTGAAGAGAAGCTTCAGGCTCTTTTGAACATTGCAATGTCATGTGTTTCGCTAGTGCCAGAGAATAGGCCTACAATGAGAGAAGTTTTAAAGATGATAAGAGATGCAAGAGGGGAAGCTCATGTATCATCTAACAGTAGTGATCACTCTCCTGGTAGATGGTCAGATACTGTTCAAAGCTTACCAAGGGAAGAACACCTGGGCATATGA 1989 0.5038 MERSSVFVLVSALCLLLSQPTGSEDDDSQALLALKSSIDVLNKLPWRAGSDVCTWVGVRDCFNGKVRKLVLEHSNLTGTLEAKILNRLDQLRVLSFKGNSLSGQIPDLSALVNLKSIFLNENNFSGEFPPSVSLLHRVKVVVLSGNQISGDIPASLLKLRRLYILYLQDNMFTGHIPGFNQTGLRYLNVSNNRLSGEIPVTPALIRFNASSFEGNPGLCGEQIEQPCRSTSIALPPSVSPSYPLIPGKAKTSTSSNRTKLIKIIGGSVGGAVMLFILCLGVVWVIGKKRGKRVGSGTRSKGGDVAEGEVVAVGREEGGGSNEGKDGVFAWESEGVGKLVFCGGGDREMSYSLEDLLKASAETLGRGIMGSTYKAVMESGFIVTVKRLKDARYPALEEFRAHIEVLGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTSGGGKPLHWTSCLKIAEDLATGLLYIHQTSGLTHGNLKSSNVLLGSDFESCLTDYGLTVFLNPDSMDEPSATSLFYRAPECRSFQRSQTQPADVYSFGVLLLELLTGKTPFQDLVQTYGSDIPRWVRSVREEETESGDEPSSGNEASEEKLQALLNIAMSCVSLVPENRPTMREVLKMIRDARGEAHVSSNSSDHSPGRWSDTVQSLPREEHLGI* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0422 662 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE 26 650 - -
Apr5g0422 662 MobiDBLite consensus disorder prediction 636 650 - -
Apr5g0422 662 MobiDBLite consensus disorder prediction 633 662 - -
Apr5g0422 662 Pfam Leucine rich repeat N-terminal domain 25 59 IPR013210 -
Apr5g0422 662 SUPERFAMILY L domain-like 26 220 - -
Apr5g0422 662 SUPERFAMILY Protein kinase-like (PK-like) 361 633 IPR011009 -
Apr5g0422 662 Gene3D Ribonuclease Inhibitor 26 181 IPR032675 -
Apr5g0422 662 Gene3D Transferase(Phosphotransferase) domain 1 433 648 - -
Apr5g0422 662 Pfam Protein kinase domain 360 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0422 662 ProSiteProfiles Protein kinase domain profile. 357 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0422 662 Gene3D Phosphorylase Kinase; domain 1 344 432 - -
Apr5g0422 662 Gene3D Ribonuclease Inhibitor 182 230 IPR032675 -
Apr5g0422 662 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 26 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0422 Apr-Chr5 4130596 4136704 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0422 4 662 Receptor kinase-like Gene Family AT1G60630 63.213 0.0 783
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr5g0422 Pkinase 8.6e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0422 - - gmx:100820186 1075.46