Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr5g0422 | ATGGAGAGATCCTCTGTGTTTGTTCTTGTCTCCGCGCTTTGTCTCTTACTGTCCCAACCTACCGGATCAGAAGACGACGATTCCCAAGCGCTTCTGGCACTCAAATCCTCCATAGACGTTCTCAACAAGCTTCCATGGCGTGCAGGAAGCGACGTGTGCACGTGGGTAGGTGTCAGAGACTGCTTCAACGGGAAAGTGAGGAAGCTAGTTCTGGAACACTCCAACCTAACCGGCACTTTGGAGGCAAAGATCTTGAACCGTTTGGATCAACTCCGAGTCCTCAGCTTCAAAGGAAACTCACTCTCCGGTCAAATCCCCGACCTCTCCGCCTTAGTCAACCTCAAATCAATATTCCTCAACGAGAACAACTTCTCCGGCGAGTTCCCCCCCTCCGTCTCCCTCCTCCACCGAGTCAAAGTCGTCGTTTTATCCGGGAACCAAATCTCCGGCGACATCCCGGCGTCCTTGCTCAAGCTCCGGCGCCTCTACATCCTCTACTTACAGGACAACATGTTCACCGGACACATCCCGGGTTTCAACCAAACCGGGCTCCGGTACCTGAACGTGTCGAACAACCGACTCTCCGGCGAGATTCCGGTGACCCCTGCATTGATCCGATTCAATGCGTCGTCGTTTGAGGGAAACCCAGGGCTGTGCGGAGAGCAGATCGAGCAACCATGCAGAAGCACGAGCATTGCGTTGCCACCATCGGTAAGCCCTAGTTATCCTCTGATTCCGGGGAAAGCGAAAACGTCGACGTCATCGAACCGCACGAAACTGATAAAGATAATCGGAGGGAGCGTTGGAGGGGCTGTTATGCTGTTTATATTATGCTTAGGTGTGGTGTGGGTGATTGGGAAGAAGCGGGGGAAGAGGGTGGGTTCTGGAACGAGGAGCAAGGGTGGTGACGTGGCGGAAGGTGAAGTTGTTGCGGTTGGAAGAGAAGAAGGTGGCGGTAGCAACGAGGGGAAAGATGGGGTTTTCGCGTGGGAGAGTGAGGGTGTAGGGAAGTTGGTGTTCTGCGGCGGAGGGGATCGGGAGATGAGTTACAGTTTGGAGGATTTGCTGAAGGCTTCGGCGGAGACATTGGGTAGGGGTATTATGGGAAGTACGTATAAGGCAGTGATGGAATCTGGGTTCATAGTTACTGTGAAGAGGTTGAAAGATGCTAGGTACCCTGCTTTAGAGGAGTTTAGGGCACACATTGAGGTGTTAGGGAGACTCAGACACCCTAACTTGGTCCCACTCAGAGCTTATTTTCAGGCCAAAGAGGAACGTCTTCTTGTTTATGATTATTTCCCCAATGGCAGCCTCTTCTCCCTCATTCACGGATCAAAAACATCTGGCGGGGGAAAGCCTCTTCACTGGACATCCTGCCTTAAAATCGCAGAAGATCTAGCAACTGGCCTTCTCTATATCCATCAGACCTCTGGCTTGACACATGGAAACCTTAAATCTTCCAATGTGTTGCTGGGTTCTGACTTTGAGTCCTGTCTTACTGATTATGGTCTCACAGTGTTCCTTAATCCTGACTCAATGGATGAGCCTAGTGCCACTTCTTTATTCTATAGAGCACCCGAATGCCGCAGCTTTCAAAGGTCACAAACCCAACCAGCTGATGTATACAGCTTTGGTGTCCTTCTTCTTGAGCTTTTGACTGGCAAAACACCCTTCCAAGACCTTGTTCAGACATATGGTTCAGATATTCCTAGGTGGGTTCGGTCGGTGCGCGAAGAAGAGACCGAGTCTGGGGATGAACCTTCCTCAGGCAATGAAGCATCTGAAGAGAAGCTTCAGGCTCTTTTGAACATTGCAATGTCATGTGTTTCGCTAGTGCCAGAGAATAGGCCTACAATGAGAGAAGTTTTAAAGATGATAAGAGATGCAAGAGGGGAAGCTCATGTATCATCTAACAGTAGTGATCACTCTCCTGGTAGATGGTCAGATACTGTTCAAAGCTTACCAAGGGAAGAACACCTGGGCATATGA | 1989 | 0.5038 | MERSSVFVLVSALCLLLSQPTGSEDDDSQALLALKSSIDVLNKLPWRAGSDVCTWVGVRDCFNGKVRKLVLEHSNLTGTLEAKILNRLDQLRVLSFKGNSLSGQIPDLSALVNLKSIFLNENNFSGEFPPSVSLLHRVKVVVLSGNQISGDIPASLLKLRRLYILYLQDNMFTGHIPGFNQTGLRYLNVSNNRLSGEIPVTPALIRFNASSFEGNPGLCGEQIEQPCRSTSIALPPSVSPSYPLIPGKAKTSTSSNRTKLIKIIGGSVGGAVMLFILCLGVVWVIGKKRGKRVGSGTRSKGGDVAEGEVVAVGREEGGGSNEGKDGVFAWESEGVGKLVFCGGGDREMSYSLEDLLKASAETLGRGIMGSTYKAVMESGFIVTVKRLKDARYPALEEFRAHIEVLGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTSGGGKPLHWTSCLKIAEDLATGLLYIHQTSGLTHGNLKSSNVLLGSDFESCLTDYGLTVFLNPDSMDEPSATSLFYRAPECRSFQRSQTQPADVYSFGVLLLELLTGKTPFQDLVQTYGSDIPRWVRSVREEETESGDEPSSGNEASEEKLQALLNIAMSCVSLVPENRPTMREVLKMIRDARGEAHVSSNSSDHSPGRWSDTVQSLPREEHLGI* | 663 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr5g0422 | 662 | PANTHER | INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE | 26 | 650 | - | - | |
Apr5g0422 | 662 | MobiDBLite | consensus disorder prediction | 636 | 650 | - | - | |
Apr5g0422 | 662 | MobiDBLite | consensus disorder prediction | 633 | 662 | - | - | |
Apr5g0422 | 662 | Pfam | Leucine rich repeat N-terminal domain | 25 | 59 | IPR013210 | - | |
Apr5g0422 | 662 | SUPERFAMILY | L domain-like | 26 | 220 | - | - | |
Apr5g0422 | 662 | SUPERFAMILY | Protein kinase-like (PK-like) | 361 | 633 | IPR011009 | - | |
Apr5g0422 | 662 | Gene3D | Ribonuclease Inhibitor | 26 | 181 | IPR032675 | - | |
Apr5g0422 | 662 | Gene3D | Transferase(Phosphotransferase) domain 1 | 433 | 648 | - | - | |
Apr5g0422 | 662 | Pfam | Protein kinase domain | 360 | 624 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr5g0422 | 662 | ProSiteProfiles | Protein kinase domain profile. | 357 | 635 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr5g0422 | 662 | Gene3D | Phosphorylase Kinase; domain 1 | 344 | 432 | - | - | |
Apr5g0422 | 662 | Gene3D | Ribonuclease Inhibitor | 182 | 230 | IPR032675 | - | |
Apr5g0422 | 662 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 26 | 650 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr5g0422 | Apr-Chr5 | 4130596 | 4136704 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr5g0422 | 4 | 662 | Receptor kinase-like Gene Family | AT1G60630 | 63.213 | 0.0 | 783 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Apr5g0422 | Pkinase | 8.6e-37 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr5g0422 | - | - | gmx:100820186 | 1075.46 |