Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0419 ATGGCGGCTACTGTATCTGCTTGGTCCAAGCCCGGCGCGTGGGCCCTAGACTCCGAAGAACATGAAGAAGAACTCCTTCAACAGAACCACAAAGACGACGAACCTAAACCACTCGTCGACTTCCCTTCCCTCGCCGTCGCCGCCGCCACCAAGCCCAAGAAGAAGAAGGCCCAAACCTACTCTCTCGCCGAGTTCACCGCCAAACCCGACCCAGCCTTCACCAACCAAGAAGATCTCTTGAATCTCCCCACCGGTCCCCGCCAGCGCTCCGCCGAGGAACTCGACCGCGACAGGAACCATCTCGGCGGAGGCTTCCGCTCCTACGGCGACCGCCCCCGCAGGAATTCTGGCGGCGATGAATCGTCCAATTCGAGGTGGGGTTCGTCTAGGGTTTCTGATGAGCCCCGCAGAAACGGCGCGTTTGGGGCTAGGGATTCGAATCGCGAGTTGCCGCCGTCGCGCGCTGATGAAATCGATAATTGGGCTGCTGCGAAGAAATCACCGAGCGGTGGGAACGGGTTCGAGAGGAAGGAGAGGGAAAGAGGGGGTTTCTTCGATTCACAGTCGCGTGCTGACGAATCTGAGAGTTGGGTTTCGAATAAGAGTTTTGTGCCGTCGGATGGACGAAGATTCGGTTCCAACGGTGGCGGTGGGTTTGAGAGAGAGAGAAAGGTTGGGTTTGGTTCCAGCGGTGGAGCAGATTCGGATAATTGGAACAAGAAGAAGGGTGAGTTCAGCGTTGGGAGTGAAAGAAGCGAGAGTGGTAGTGGGGGAAGGCCAAAGCTTGTTCTGCAACCTCGGAAAGTGTCGGCGAGTAATGAGAACCAGGAAGGTGGTTCTGGGAATGTGACAAAGCCTAAGGGTCTGAATCCGTTTGGTGAAGCAAGGCCAAGGGAACAGGTTTTGGCAGAGAAAGGGCAAGATTGGAAGAAGTTTGATGAGCAGCTTGAGAGCATGAAGATTAAGGAGACTAATGTGGATGGGTTTGGGAAGAGGGCTTTTGGTTCTGGCAATTCAAGCAATGCAGGACGTGGTGCTAGTTTTCCTGATGATCGCACTGAGAGGAGTTGGAGGAGGCCACAATCTGATGATGATCGTCCAAAAAGTGCTGAGAAAGTGGAGGATGAACACGTTGAAGAAAACTGA 1146 0.5445 MAATVSAWSKPGAWALDSEEHEEELLQQNHKDDEPKPLVDFPSLAVAAATKPKKKKAQTYSLAEFTAKPDPAFTNQEDLLNLPTGPRQRSAEELDRDRNHLGGGFRSYGDRPRRNSGGDESSNSRWGSSRVSDEPRRNGAFGARDSNRELPPSRADEIDNWAAAKKSPSGGNGFERKERERGGFFDSQSRADESESWVSNKSFVPSDGRRFGSNGGGGFERERKVGFGSSGGADSDNWNKKKGEFSVGSERSESGSGGRPKLVLQPRKVSASNENQEGGSGNVTKPKGLNPFGEARPREQVLAEKGQDWKKFDEQLESMKIKETNVDGFGKRAFGSGNSSNAGRGASFPDDRTERSWRRPQSDDDRPKSAEKVEDEHVEEN* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0419 381 MobiDBLite consensus disorder prediction 15 38 - -
Apr5g0419 381 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 373 IPR010433 GO:0003743
Apr5g0419 381 MobiDBLite consensus disorder prediction 1 308 - -
Apr5g0419 381 MobiDBLite consensus disorder prediction 137 161 - -
Apr5g0419 381 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 1 373 - -
Apr5g0419 381 MobiDBLite consensus disorder prediction 323 381 - -
Apr5g0419 381 MobiDBLite consensus disorder prediction 348 381 - -
Apr5g0419 381 MobiDBLite consensus disorder prediction 171 188 - -
Apr5g0419 381 MobiDBLite consensus disorder prediction 189 207 - -
Apr5g0419 381 Pfam Plant specific eukaryotic initiation factor 4B 7 330 IPR010433 GO:0003743
Apr5g0419 381 MobiDBLite consensus disorder prediction 268 283 - -
Apr5g0419 381 MobiDBLite consensus disorder prediction 89 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0419 Apr-Chr5 4101558 4104123 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0419 1 359 Eukaryotic Initiation Factors Gene Family AT4G38710 47.132 2.32e-62 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0419 - - pvu:PHAVU_011G033300g 522.702