Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0402 ATGGGCACCTTTTTCACTCCTTCTACTGTTTCAACCACCAGCAAATGGCTCGGCTTCGTCACCGCCGTTTGGATCCAATGCATCTCCGGCAACAACTACACTTTTTCAAACTACTCCGACGCTGTCAAATCCCTCATGCATCTCACTCAGGTCCAACTCAATAACCTATCCGTCGCTAAAGATGTCGGAAAAGCCTTCGGTCTTCTCGCCGGCCTCGCCTCCGATCGCTTCCCAACCTGGGTCATTCTTCTCATTGGCTCCGTCGAGGGTCTCATCGGCTACGGCGCTCAGTGGCTCGTCGTTAGCCAGAGAATCAAGCCGCTTCCCTATTGGCAGATGTGCGTGTTTCTGTGCATGGGAGGGAATAGCACAACGTGGATGAATACTGCGGTTTTGGTGACTTCCATAAGAAACTTTAGAAGCAACAGGGGTCCTGTTTCGGGCATTCTCAAGGGTTTTGTGGGGTTGAGCACTGCCATTTTCACTAACCTCTGTTCTGCTCTTTTCGCCGACGACCCTGCCTCCTTCCTCGTCATGCTCGCTATCATTCCCTTCGCCGTTTGTCTCACCGGTGTCTTTTTCCTCCGAGAGGTTCCTCCTTCTGAAGACACACATGAGACTAAGTACTTCGGCGTTTTCAACGCCATCGCCGTCGTCGTCGCGCTTTACTTGTTGGCTTATGGGTTCATTCCCAGCCCTAACACGTTGGTGTCTCGAGTGTTCGTCGCCGTTTTGCTGATTCTGTTGGTCTCGCCGCTGGGGGTCCCGGTGTACTCGTACTTGAAGGAGCGGTTTCGAGCGGGAAATGACGTTGAGGAGCAGCGGGTGAACGAACCGTTGATTCAAAGCAAGGAGAAGGGGAGTGAAAGCGTGGCGGTGGTGGAGGAAGTGGTGGTGGTGGTAAAGAGGGTACCGGTGGTGGGGGAGGAGCACACGATAATGGAGGCGTTGAGGAGCGTTGACTTTTGGATCTTGTTTGTGTCTTTTCTTTGCGGGGTTGGAACGGGTTTGGCCGTGATGAACAATATGGGTCAAATCGGGTTGGCGCTTGGTTACAGTGATGTTTCGCTCTTTGTGTCGTTTACGAGTATTTGGGGGTTTTTCGGACGGATCATATCGGGTTCTGTTTCGGAGCTATCCATCAAGAAAGCAGCAACACCTAGACCTCTTTGGATGGCAGCATCTCAGCTTCTGATGGCTGTGGGTTACATACTCATGGCCTTGGCTATGCCCGGTTCCCTTTACGTTGGGTCTATTTTAGTTGGCATATGTTATGGAGTGAGGCTTGCTATTACAGTGCCAACAGCCTCTGAGTTGTTTGGACTCAAATACTATGGTCTCATCTATAATATTCTCATCCTTAACCTTCCACTGGGGTCTTTCCTCTTTTCTGGGTTGCTTGCGGGCATATTGTATGACATGGAAGCAACTACAATAGAGGGAGGGGGCAACACCTGCGTTGGAGGTCATTGTTATAGGCTAGTCTTCATAGTCATGACAGGAGCGTGCATTGTTGGGTTCTTCTTAGACATTCTTTTGTCATTTAGAACCAAGAACATTTACAAGAAGATTTCCATGAGCAAGAAATCCAAGGAAATCCTTAGGGACATCAAATAG 1617 0.5003 MGTFFTPSTVSTTSKWLGFVTAVWIQCISGNNYTFSNYSDAVKSLMHLTQVQLNNLSVAKDVGKAFGLLAGLASDRFPTWVILLIGSVEGLIGYGAQWLVVSQRIKPLPYWQMCVFLCMGGNSTTWMNTAVLVTSIRNFRSNRGPVSGILKGFVGLSTAIFTNLCSALFADDPASFLVMLAIIPFAVCLTGVFFLREVPPSEDTHETKYFGVFNAIAVVVALYLLAYGFIPSPNTLVSRVFVAVLLILLVSPLGVPVYSYLKERFRAGNDVEEQRVNEPLIQSKEKGSESVAVVEEVVVVVKRVPVVGEEHTIMEALRSVDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYSDVSLFVSFTSIWGFFGRIISGSVSELSIKKAATPRPLWMAASQLLMAVGYILMALAMPGSLYVGSILVGICYGVRLAITVPTASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYDMEATTIEGGGNTCVGGHCYRLVFIVMTGACIVGFFLDILLSFRTKNIYKKISMSKKSKEILRDIK* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0402 538 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 8 532 - -
Apr5g0402 538 Gene3D MFS general substrate transporter like domains 314 520 IPR036259 -
Apr5g0402 538 CDD MFS_Mch1p_like 14 506 - -
Apr5g0402 538 SUPERFAMILY MFS general substrate transporter 19 519 IPR036259 -
Apr5g0402 538 Gene3D MFS general substrate transporter like domains 11 269 IPR036259 -
Apr5g0402 538 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 532 - -
Apr5g0402 538 Pfam Nodulin-like 15 257 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0402 Apr-Chr5 3941416 3945333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0402 15 532 Nodulin-like Gene Family AT4G34950 68.921 0.0 762
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0402 - - gmx:100800237 861.677