Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0389 ATGACAGTTGAGAAAAGGTTTGTTTTGGTGGGGATTAGAATCGATGGCAATAGTAGACAACTACTCGACTGGGCTCTTGTTAAAGTTGCTGAACCTGGGGATTGTGTTATTGCAGTTCATGTTGTTAAAAGTTCAGATTATGTTTCCAAAAACAAGACCCTGATAGATAGCTATTTAGAGGTTTATGAAGGCCTATGTGGTGTGAAAAAGGTTGGTCTCACCGGTCAAATATTAACAGGAAGCTCCATCAGAAACATTCTTGTTAGAGAAGCAAAAAACCATGCTGCTCTGGCTCTAGTGGTAGGGGGTCGCGCTGCCACAGCTAAATATTGCGCCAAACGACTACCACCCACCACCAATGTTCTAGCCATTCAAGACTCGAGAATTGTCTTCAGGAGGTGCACCAATAAACAACTACCAGGTGGTCCTATGCTGGATCCAAGGCCAAGTTTAACAATCATTGAAAACACATGTCACTCAGTGGTGGAGATTGAGAAATCAACAAGGCAAAATAGTTTAGAGTTGAAGGAAGAAGAATTTAACGTATCAGAAAGGTGCAAGTCAAGGTCAATATCTATGTTTGCAGGTGACCCTACTGAGCAGAAACTTGGGTGGCCTCTACTCCGCAGAGCCAATTCAGGAATCTCACATGCAAGGGACATGTCAGTGGTACAATGGGTAATGAGCTTACCAGACCGCTCACCACATAAAAGTCCTCACTTTTTTTCCATTGAGGAAAATCCATCAGAAAGGGGCATCAGTGACTTTGAGGATGAGAGCTCTAAAAATTCTTCACCTACATCTGTTGAAATACCAAAGGGCTTAGAGACGTTAAATGTAAATTCACCCAATTGCAAGTGGTTCAGCCTTGAGGTTCTCAAGTCTTGCACTAGCCAATTCTCTTCAGGTAACTTGATTGGGAAAGGAGGGAGCAATCGTGTGTACAAAGGAGTCCTCCCTGATGGAAAGCCAATCGCAGTCAAAGTGTTGCAGTCATCAAAAGGAGCCTGGAAAGATTTTGCTCTTGAGGTGGAAATAATATCCTCATTGAAGCACAATAGCGTTACCCCTTTACTTGGGATTTGCATAGAAGACAATGCTTTAATCTCTGTTTATGATTATTTCCCCAAAGGGAGCTTAGAGGAAAATCTGCATGGGAAGAACATGGACGGATCCATCTTGCCATGGGAAGTGAGATTTAATGTAGCTGTTGGGATCGCTGAGGCCCTTGATTACCTACACGTGGAAGCTTTGAAGCCTGTTATACATAGAGATGTCAAGTCTTCAAACATTCTTCTTTACCATGGGTTTGAACCTCAGTTGTCTGATTTCGGACTTGCAATATGGGGACCAACAACTTCATCCTTTTTGACACAAGAAGATGTAGTAGGAACATTTGGTTATCTTGCTCCTGAATACTTCATGTATGGAAAGGTTAGTGACAAGATAGATGTCTACGCCTTTGGTGTAGTACTTCTTGAACTAATATCAGGAAGGGAACCAATCAGCTCTGAACCATGCAAGGGACAAGAGAGCTTGGTCGTGTGGGCAAAACCAATGATAGAGAGTGGGGATATTAAATGCTTATTGGACCCAAATTTAGAACGGAAATTCGATGAGGCCCAATTGCAAAGAATGGTTCTGGCAGCATCTTTGTGCATCACACGGGCTGCTCGGCTCCGTCCTAAACTGAAGCAGATATTGAAGATCCTAAAAGGAGAAGAGGAAGTTGAATATTTCTTCAACTCCCATGGGAATGATCACGGAGACTCAGAAAATCAAGAGAACATTGATGATGAAGTCTATCCAAATTCAAGTGCTGAGTTACACCTGAGTCTTGCATTACTTGGTGTTGACGATGACATTACATCACATAGTAGCACAGACCACAGTTATAGTGAACACTTGAAAGAACAATGGAGCAGATCATCGAGTTTTAATTAG 1944 0.4239 MTVEKRFVLVGIRIDGNSRQLLDWALVKVAEPGDCVIAVHVVKSSDYVSKNKTLIDSYLEVYEGLCGVKKVGLTGQILTGSSIRNILVREAKNHAALALVVGGRAATAKYCAKRLPPTTNVLAIQDSRIVFRRCTNKQLPGGPMLDPRPSLTIIENTCHSVVEIEKSTRQNSLELKEEEFNVSERCKSRSISMFAGDPTEQKLGWPLLRRANSGISHARDMSVVQWVMSLPDRSPHKSPHFFSIEENPSERGISDFEDESSKNSSPTSVEIPKGLETLNVNSPNCKWFSLEVLKSCTSQFSSGNLIGKGGSNRVYKGVLPDGKPIAVKVLQSSKGAWKDFALEVEIISSLKHNSVTPLLGICIEDNALISVYDYFPKGSLEENLHGKNMDGSILPWEVRFNVAVGIAEALDYLHVEALKPVIHRDVKSSNILLYHGFEPQLSDFGLAIWGPTTSSFLTQEDVVGTFGYLAPEYFMYGKVSDKIDVYAFGVVLLELISGREPISSEPCKGQESLVVWAKPMIESGDIKCLLDPNLERKFDEAQLQRMVLAASLCITRAARLRPKLKQILKILKGEEEVEYFFNSHGNDHGDSENQENIDDEVYPNSSAELHLSLALLGVDDDITSHSSTDHSYSEHLKEQWSRSSSFN* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0389 647 SUPERFAMILY Protein kinase-like (PK-like) 279 571 IPR011009 -
Apr5g0389 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Apr5g0389 647 SMART serkin_6 300 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0389 647 Pfam Protein kinase domain 302 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0389 647 Gene3D Phosphorylase Kinase; domain 1 263 374 - -
Apr5g0389 647 Gene3D Transferase(Phosphotransferase) domain 1 375 585 - -
Apr5g0389 647 PANTHER OS08G0249100 PROTEIN 3 625 - -
Apr5g0389 647 ProSiteProfiles Protein kinase domain profile. 300 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0389 647 MobiDBLite consensus disorder prediction 238 270 - -
Apr5g0389 647 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK7 ISOFORM X1 3 625 - -
Apr5g0389 647 MobiDBLite consensus disorder prediction 238 258 - -
Apr5g0389 647 CDD USP_Like 8 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0389 Apr-Chr5 3742759 3746550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0389 288 646 Trihelix Transcription Factor Family AT1G70460 40.274 5.23e-73 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Apr5g0389 Pkinase 4.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0389 - - gmx:100789189 1054.66