Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0388 ATGGATGACGGTGAGCTTGATTTCTCGAACCAGGAAGTGTTTTCGAGTCCGAACATGGCCGAGCTCCCTAGTAGTGGTTCGATGGACAGTTTCTTCGATGAACTTCTCAAGGACACACACGCTTGCACTCACACTCACACGTGCAACCCTCCTGGCCCCGATTTTTCTCACACACACACGTGTTACCATGTCCACACCAAAATTGTCCCTGCCCCTGCCGAAGACCAGGTTGCCACCGATGACACTGCTGAGTCTGCTGAGAAGAAGTCCAAGAAACGGCCCCTTGGTAACAAAGAAGCGGTTCGCAAATACCGCGAGAAGAAGAAAGCCCGTGCTGCTTCTCTGGAGGATGAGGTTGTGAAATTGAGAGCTCTTAACCAGCACTTAATGAAGAAGTTGCAGGGTCAGGCTGCTTTGGAGGCAGAAATTTCTAGGCTCAAATGCTTGTTGGTTGACATAAGGGGAAGGATTGAAGGAGAAATTGGGTCGTTTCCGTATCAGAAATCGCCTAATTCCGACCCTGCAATTCCTAACCTGCCTGGTTCTTATGTGATGAACCCTTGTAACATGCAGTGTGATGATCGCGTCTATTGCCTTCATCCTGGAGCAGATGGAAAGATTGCGGAAGGTGTGTCTCTGAATGGGGAAGGATTGGGTGGTTGTGAGTTTGAGAGCCTCCAGTGTCTAGCAAGCCAGAATTTGGGGCTCAAGGAACTTCGCCAGTGCGGAGTTGGACAGACGGTGTCTAATGTCAATTCTTCTGCGTCAAATAAAAGAAAAGGGGGGTCTCGTGCAGTAACAACTGGTTGA 810 0.4951 MDDGELDFSNQEVFSSPNMAELPSSGSMDSFFDELLKDTHACTHTHTCNPPGPDFSHTHTCYHVHTKIVPAPAEDQVATDDTAESAEKKSKKRPLGNKEAVRKYREKKKARAASLEDEVVKLRALNQHLMKKLQGQAALEAEISRLKCLLVDIRGRIEGEIGSFPYQKSPNSDPAIPNLPGSYVMNPCNMQCDDRVYCLHPGADGKIAEGVSLNGEGLGGCEFESLQCLASQNLGLKELRQCGVGQTVSNVNSSASNKRKGGSRAVTTG* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0388 269 Coils Coil 98 132 - -
Apr5g0388 269 PANTHER CCAAT/ENHANCER BINDING PROTEIN 1 240 - -
Apr5g0388 269 Gene3D - 76 153 - -
Apr5g0388 269 PANTHER BASIC LEUCINE ZIPPER 23 1 240 - -
Apr5g0388 269 SUPERFAMILY Leucine zipper domain 89 135 IPR046347 GO:0003700|GO:0006355
Apr5g0388 269 MobiDBLite consensus disorder prediction 72 100 - -
Apr5g0388 269 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 87 134 IPR004827 GO:0003700|GO:0006355
Apr5g0388 269 MobiDBLite consensus disorder prediction 81 100 - -
Apr5g0388 269 SMART brlzneu 85 152 IPR004827 GO:0003700|GO:0006355
Apr5g0388 269 MobiDBLite consensus disorder prediction 1 22 - -
Apr5g0388 269 Pfam Basic region leucine zipper 87 142 IPR004827 GO:0003700|GO:0006355
Apr5g0388 269 CDD bZIP 91 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0388 Apr-Chr5 3736354 3739587 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0388 1 265 bZIP Transcription Factor Family AT4G35040 65.299 5.64e-119 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr5g0388 bZIP_2 3e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0388 K25785 - gmx:780549 454.907