Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0380 ATGGGTTTTCATTTACCTGTTATCAGAAAGGCATCATTTGCTACAAACCAATCAGCTTCAAAAGTTGTGGACGTGCCAAAGGGCTATCTAGCCGTCTACGTTGGAGAGAAAATGAGGCGGTTTGTGATACCCTTGACATACTTGTGCCAACCTTCATTTCAAGATTTGTTGAGTCAAGCTGAAGAAGAATTTGGGTATGACCATCCAATGGGTGGTCTTACAATTCCTTGTGGAGAAGATATGTTCTTAGATATCACTTCTCGTTTGAACAAGTGTTAA 279 0.405 MGFHLPVIRKASFATNQSASKVVDVPKGYLAVYVGEKMRRFVIPLTYLCQPSFQDLLSQAEEEFGYDHPMGGLTIPCGEDMFLDITSRLNKC* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0380 92 Pfam Auxin responsive protein 14 88 IPR003676 GO:0009733
Apr5g0380 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 5 91 IPR003676 GO:0009733
Apr5g0380 92 PANTHER AUXIN-INDUCED PROTEIN 10A5 5 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0380 Apr-Chr5 3594512 3594871 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0380 14 82 Calmodulin-binding Proteins AT3G43120 55.072 5.92e-20 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0380 K14488 - gmx:112998524 154.066