Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0377 ATGGGTTTTCGTTTACCTGGTATCAGAAAGGCATCATCTGCTGCTAACCAAGCATCTTCCAAAGTTGTGGAGGTGCCAAAAGGCTATCTTGCTGTGTACGTTGGAGAGAGAATGAAGCGGTTTGTGATTCCCATATCATACTTGAACCAACCTTCATTCCAAGACGTGTTGAGTCAAGTTGAGGAAGAGTTTGGGTATTATCACCCCACGGGTGGCCTCACAATTCCTTGCTGCGAAGATGTCTTCCAACAGATAACTTCTCACCTAGAAGGACTATAA 279 0.448 MGFRLPGIRKASSAANQASSKVVEVPKGYLAVYVGERMKRFVIPISYLNQPSFQDVLSQVEEEFGYYHPTGGLTIPCCEDVFQQITSHLEGL* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0377 92 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
Apr5g0377 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
Apr5g0377 92 Pfam Auxin responsive protein 12 88 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0377 Apr-Chr5 3534053 3534402 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0377 24 91 Calmodulin-binding Proteins AT3G43120 45.588 1.00e-16 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0377 K14488 - gmx:113002386 153.295