Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0375 ATGGGTTTCAGCGTAGCAAGTATTATAAGACGGGCATCATTCTCAACAATCCAAGCAGCCTCCAAGGAGGTTGAAGTACCAAAAGGCTATCTCGCAGTCTATGTTGGAGATAAAATGAGGCGGTTTGTGATTCCAGTATCGTACTTGAACCAACCATCATTTCAAGAATTACTAAGTCAAGCAGAAGAAAAATTTGGATACGATCATCCAACAGGTGGTCTCACAATTCCGTTCCTTCGATATCTTTTCACGAAAACAATGGGTTTCGGCATACGAAGTATTATTAGACGGGCATCATTTTCTGCTGCCCAAGCAGCTCCCAAGGGACTTGAAGTCCCAAAAGGATATCTTGCAGTCTACGTTGGAGAAAAAATGAGGCGGTTCGTGATTCGAGTATCATACTTGAACCAACCTTCATTTCAAGAATTACTAAGTCAAGCAGAAGAAGAATTTGGATATGATCATCCAATGGGGGCTCTCACAATTCCATGCAATGAGGATGAGTTTCTAAACCTCACTTCTCGCTTGAATGAGTTCTAA 540 0.4167 MGFSVASIIRRASFSTIQAASKEVEVPKGYLAVYVGDKMRRFVIPVSYLNQPSFQELLSQAEEKFGYDHPTGGLTIPFLRYLFTKTMGFGIRSIIRRASFSAAQAAPKGLEVPKGYLAVYVGEKMRRFVIRVSYLNQPSFQELLSQAEEEFGYDHPMGALTIPCNEDEFLNLTSRLNEF* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0375 179 PANTHER AUXIN-INDUCED PROTEIN 10A5 1 80 - -
Apr5g0375 179 PANTHER AUXIN-INDUCED PROTEIN 10A5 87 178 - -
Apr5g0375 179 Pfam Auxin responsive protein 13 87 IPR003676 GO:0009733
Apr5g0375 179 Pfam Auxin responsive protein 99 175 IPR003676 GO:0009733
Apr5g0375 179 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 80 IPR003676 GO:0009733
Apr5g0375 179 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 87 178 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0375 Apr-Chr5 3518393 3522203 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0375 15 77 Calmodulin-binding Proteins AT3G43120 52.381 4.19e-17 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0375 - K14488 aip:110269930 248.054