Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0374 ATGGGTTTTCGTTTACTTGGTATCAGAAAGGCATCACTTGCTGCAAACCAAGCATCTTCAAAAGCAGTGGACGTCCCAAAGGGCTATCTTGCGGTGTACGTTGGAGAGAAATTGAAGCGGTTTGTGATTCCCATATCACACTTGAACCAGCCTTTATTCCAAGACTTGTTGAGTCAAGCTGAGGAAGAGTTCGGGTATGATCATCCCATGGGTGGCCTCACAATTCCTTGCGGTGAAGATGTCTTCCAACACATAACTTCAAGACATATAACAATGGGTTTTCGTTTACCTGGCATCAGAAGGGCATCATTTGCTGCAAACCAAGCATCTTCAAAAGCTTTGGACGTGCCAAAGGGCTACCTTGCAATTTATGTTGGAGAGAAAATGAAGCGGTTTGTAATCCCCGTATCATACTTGCACCAATCTTCATTTCAAGATTTGTTGAATCAAGCTGAGGAAGAATTTGGATATGACCATCCAATGGGTGGTCTCACAATTCCTTGTGGAGAAGATGTGTTTTTAGATATCATTTCTCGTTTGAATAAGTGTTAA 552 0.4221 MGFRLLGIRKASLAANQASSKAVDVPKGYLAVYVGEKLKRFVIPISHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCGEDVFQHITSRHITMGFRLPGIRRASFAANQASSKALDVPKGYLAIYVGEKMKRFVIPVSYLHQSSFQDLLNQAEEEFGYDHPMGGLTIPCGEDVFLDIISRLNKC* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0374 183 Pfam Auxin responsive protein 101 180 IPR003676 GO:0009733
Apr5g0374 183 Pfam Auxin responsive protein 14 87 IPR003676 GO:0009733
Apr5g0374 183 PANTHER AUXIN-INDUCED PROTEIN 6B 1 88 - -
Apr5g0374 183 PANTHER AUXIN-INDUCED PROTEIN 6B 92 181 - -
Apr5g0374 183 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 88 IPR003676 GO:0009733
Apr5g0374 183 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 92 181 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0374 Apr-Chr5 3506382 3519825 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0374 4 85 Calmodulin-binding Proteins AT3G43120 47.059 1.28e-19 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0374 - K14488 gmx:112997918 256.914