Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0372 ATGGGTTTTCGTTTACCTAGTATCAGAAAGGCAACATCTGCTGCTAACCAAGCATCTTCACAAGTTGTGGAGGTGCCAAAAGGCTATCTTGCTGTGTATGTTGGAGAGAGAATGAAGCGGTTTGTGATTCCCATATCATACTTGAACCAACCTTCATTCCAAGACTTGTTGAGTCAAGTTGAGGAAGAGTTTGGATATTATCACCCCAAGGGTGGCCTCACAATTCCTTGCTGCGAAGATGTCTTCCAACAGATAACTTCTCACCTAGAAGGACTATAA 279 0.4301 MGFRLPSIRKATSAANQASSQVVEVPKGYLAVYVGERMKRFVIPISYLNQPSFQDLLSQVEEEFGYYHPKGGLTIPCCEDVFQQITSHLEGL* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0372 92 Pfam Auxin responsive protein 12 88 IPR003676 GO:0009733
Apr5g0372 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
Apr5g0372 92 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0372 Apr-Chr5 3495768 3496076 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0372 24 91 Calmodulin-binding Proteins AT3G43120 47.059 5.67e-17 69.3