Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0368 ATGTCGCCGACGACCGGAAACTGCAGCAAAATCCGTCGCATTGTTAGGGTTCGGCAAATGCTTCTCCGGTGGCGGACGAAGGCGCGGTTGGCGGCGGAGAGAGCGCCGTCGGATGTGCCGGCGGGACACGTGGCGGTGTGCGTGGGACCCAGCAAAAAGAGGTTCATCGTGCGCGCGACGCACCTGAACCACCCGATCTTCAAGATGCTTCTGGTCCAAGCTGAGGAAGAGTATGGGTTCTGCAACCATGGCCCACTCGCTATACCCTGCAATGAGTCTCTATTCGAAGAGCTTCTTCGGGTCATGGCCCGACCCGAATCCACTCTCGACGATTTCCAGAGACGTTGCCACGTCGATGTCAGAAGTGGCTTTGACTTTGTCGGAGACTCGCGGCCGTTGCTTCACGACGAGTTAATCTGCTGA 423 0.5816 MSPTTGNCSKIRRIVRVRQMLLRWRTKARLAAERAPSDVPAGHVAVCVGPSKKRFIVRATHLNHPIFKMLLVQAEEEYGFCNHGPLAIPCNESLFEELLRVMARPESTLDDFQRRCHVDVRSGFDFVGDSRPLLHDELIC* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0368 140 Pfam Auxin responsive protein 17 101 IPR003676 GO:0009733
Apr5g0368 140 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 136 IPR003676 GO:0009733
Apr5g0368 140 PANTHER SMALL AUXIN-UP RNA-RELATED 6 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0368 Apr-Chr5 3463501 3464048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0368 6 134 Calmodulin-binding Proteins AT4G34750 48.252 7.48e-41 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0368 K14488 - jre:108986945 216.853