LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr5g0366	ATGGCCGCGACTGCACCTCCGAATCTCTCCACTTTCTCCAAACCCTCCTCTCTTCAGACCCACCCTTTCAACAAAACCCTCCCAAAACCCACTCTCCCACGCGCCGCTTTCAAAACCCCTCTCCTCGTTTCCTCCAAAAACCCCATTTCCGACATTACCCTCGCCTACAACCCGCGCTCTCAACCCCTTCTCGACGATGAGAAGCCCCGAGAAGAGTGCGGCGTCGTGGGCATATATGGCGACCCAGAAGCCTCTCGTCTCTGCTACCTCGCTCTCCACGCGCTCCAGCACCGTGGACAGGAAGGTGCCGGCATCGTCACTGTTCACGACAACGTTCTCCAATCCATCACCGGCGTTGGCCTCGTCTCCGATGTGTTCAACGAATCAAAGCTTGATCAGTTACCCGGAAGTTTAGCCATTGGGCATGTTCGATACTCCACTGCAGGACAATCCATGCTAAAAAATGTTCAACCTTTTGTTGCTGGGTACCGTTTTGGCTCTGTTGGGGTTGCTCATAATGGTAATTTGGTGAACTATCGCACCTTAAGGGCGAAGCTTGAAGAGAATGGATCAATTTTCAACACCACTTCTGACACAGAAGTGGTTCTTCATCTTATTGCGACCTCAAAGCACAGGCCTTTCATATTGAGGATCGTTGATGCCTGTGAGAAACTTGAAGGGGCTTATTCTATTGTGTTTGTGACAGCGGATAAGCTTGTTGCGGTGAGAGATCCATTTGGGTTTAGGCCTTTAGTTATGGGGAGGAGAAGCAATGGTGCTGTTGTTTTTGCATCCGAGACTTGTGCTCTTGATTTGATTGAAGCCACGTACGAGAGAGAGGTGTATCCTGGTGAGGTTTTGGTGGTGGATAAAAATGGGGTTCAGTCTCTTTGCCTTATGTCTCATCCACAGCCAAAGCAATGCATTTTTGAGCATATTTACTTTGCACTTCCAAATTCTGTGGTTTTTGGGAGGTCTGTGTACGAATCTCGCAGGCAATTTGGTGAAATATTGGCCACTGAGAGTCCTGTGGATTGTGATGTTGTGATAGCGGTTCCTGATTCTGGCGTTGTAGCTGCGCTTGGTTATGCTGCTAAAGCTGGGGTTCCTTTTCAGCAGGGTTTGATAAGGTCACACTATGTGGGAAGGACATTCATTGAGCCTTCTCAGAAGATTAGGGACTTTGGTGTGAAGCTGAAGCTCTCCCCAGTCCGTGCTGTGCTTGAAGGTAAAAGGGTTGTGGTTGTGGATGATTCCATTGTGAGAGGAACAACCTCGTCCAAAATAGTAAGGTTGCTAAAGGAAGCTGGTGCTAAAGAGGTCCACATGAGGATTGCTAGCCCCCCAATTATTGGGTCTTGTTATTATGGGGTGGACACACCTAGTTCTGAAGAGTTGATTTCTAATAGGATGAGTGTGGAGGAAATAAGGGAGTTTATTGGGTCTGATTCACTTGCTTTTTTGCCTTTTGATAGCTTGAAGAGGTTGTTGGGTAATGAATCTCCCAATTTTTGTTATGCTTGTTTCTCCGGGAATTACCCTGTTGAGCCTAGGGAACTTAAGGTGAAGAGGGTTGGTGATTTTGTGGATGATGGCTTAAATGGGAGTTTGGAGTCTATTGATGGGGGTTGGGTTCAGGCAAACCGAAATCAGAAAGAGGTGAAGGTGGGTACTAGTCTCTGA	1683	0.4771	MAATAPPNLSTFSKPSSLQTHPFNKTLPKPTLPRAAFKTPLLVSSKNPISDITLAYNPRSQPLLDDEKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVTVHDNVLQSITGVGLVSDVFNESKLDQLPGSLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYRTLRAKLEENGSIFNTTSDTEVVLHLIATSKHRPFILRIVDACEKLEGAYSIVFVTADKLVAVRDPFGFRPLVMGRRSNGAVVFASETCALDLIEATYEREVYPGEVLVVDKNGVQSLCLMSHPQPKQCIFEHIYFALPNSVVFGRSVYESRRQFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIGSCYYGVDTPSSEELISNRMSVEEIREFIGSDSLAFLPFDSLKRLLGNESPNFCYACFSGNYPVEPRELKVKRVGDFVDDGLNGSLESIDGGWVQANRNQKEVKVGTSL*	561

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr5g0366	560	TIGRFAM	purF: amidophosphoribosyltransferase	73	514	IPR005854	GO:0004044\|GO:0009113
	Apr5g0366	560	ProSiteProfiles	Glutamine amidotransferase type 2 domain profile.	73	292	IPR017932	-
	Apr5g0366	560	CDD	GPATase_N	73	323	IPR035584	-
	Apr5g0366	560	PANTHER	AMIDOPHOSPHORIBOSYLTRANSFERASE	16	545	-	-
	Apr5g0366	560	Pfam	Glutamine amidotransferase domain	151	270	IPR017932	-
	Apr5g0366	560	Gene3D	-	332	496	IPR029057	-
	Apr5g0366	560	PANTHER	AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC	16	545	-	-
	Apr5g0366	560	CDD	PRTases_typeI	335	446	IPR000836	-
	Apr5g0366	560	SUPERFAMILY	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	73	296	IPR029055	-
	Apr5g0366	560	MobiDBLite	consensus disorder prediction	1	31	-	-
	Apr5g0366	560	MobiDBLite	consensus disorder prediction	1	26	-	-
	Apr5g0366	560	PIRSF	Pur1	69	527	IPR005854	GO:0004044\|GO:0009113
	Apr5g0366	560	Pfam	Phosphoribosyl transferase domain	347	442	IPR000836	-
	Apr5g0366	560	SUPERFAMILY	PRTase-like	308	519	IPR029057	-
	Apr5g0366	560	Hamap	Amidophosphoribosyltransferase [purF].	72	513	IPR005854	GO:0004044\|GO:0009113
	Apr5g0366	560	Gene3D	Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1	73	514	IPR029055	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr5g0366	Apr-Chr5	3443644	3446032	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr5g0366	65	546	PRT Gene Family	AT2G16570	86.983	0.0	865

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr5g0366	K00764		-	gmx:100791919	1001.12