Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0350 ATGGAGTTTGTTTTGCAATTTGTTCATCCTTCAACCATTCTTTTTCTTCTCCTCCCTATCTCAGTCTTCTTCGTTGTTTTCATACCTTACCTATGGAAGAAGCTCCCTTACCCACCAGGCCCAAAGGGGCTACCCATCGTAGGAAATTTGTTCATGATGGATCAACTTACACACCGTGGTTTGGCTCAACTTGCCAAACAGTACGGTGGGCTTTGTCATCTCCGAATGGGTATGCTACATATAGTGGCTGTGTCTACACCAGAAATGGCCCGTGAAGTGCTCCAAGCCCAGGACGGTGATTTCTCTAACAGGCCCGCAAACGTGGCAATTACTTACTTAACATATGATCGAGCTGACATGGCTTTTGCAAACTACGGCCCGTTTTGGCGACAAATGCGTAAGATTTGTGTGATGAAATTGTTTAGCCGAAAACGGGCCGAATCATGGGCTTCCGTACGCGAAGAGGTTGAAGGAATGGTCCAAACCGTGGCAAGTAAAATTGGCTCACCTATTAACTTGGGTGCGATGATTTTCGCTCTAACTAGGAGCATCACCTTTAAGGCCGCGTTTGGGGCTAGCTTAAATGAAGGACAAGAGGAATTCATGAAAATCTTGCAAGAGTTCTCAAAGCTCTTTGGAGCTTTCAACATTGCGGATTTTATTCCATGGTTAGGTTGGTTTCATGCACAAGAGTTTAATAAAAGAATGGCAAATGCACGACAAGCACTTGATGTTTTCATTGACCAGATTATTGATGATCACATGTCAAAGAGGAAAAACATGAAGCAAAAGAGCGTCGAGAACGAAGTGGATTCAGATATGGTTGATGAGCTAATGGTTTTCCTTTATGAGAAAGATGGTGACACTACTCACTCAGATAATCCTCCATTGATGCTTAAGTTGACCAGAGACAACATCAAAGCTCTTATCATGGACGTCATGTTTGGGGGAACAGAGACAGTAGCATCAGTGGTAGAATGGACCTTAGCAGAGCTGATGAAGAGTCCAGTGGATCTCGAAAAGGTCCAACAAGAGCTATTGGATGTAGTGGGCTTGGGCCGAAGATTCAATGAATTTGATCTTGAAAAATTGACATATCTTAAATGCGCTATCAAAGAAACCTTGCGACTACACCCTCCAATTCCACTTCTTCTACATGAGGCTGCAAAGGATAGTGTTCTTGCAGGTTACGCTATTCCAAAAGGAACTCGTGTTTGGATCAATGCATGGGCCATTGGTCGTGACGAGATGGCATGGGATGAACCAGAGAAATTCAACCCATCGAGGTTTTTGAATGATGACATGCCAGATTTTAAAGGGGGAAATTTTGAGTTTATTCCTTTTGGGTCAGGTCGAAGGTCATGCCCAGGAATGCAACTTGGCCTCTATGCTGTAGAAATGGCTGCGGCTCACTTGCTTCATTGTTTCAAATGGGAGTTACCCAATGGAATGAAACCCAGTGAGCTTGATATGAATGACGTGTTTGGCCTCACTGCACCAAGAGCTGTTCAACTTGTTGCGGTACCTAGTTATCGTCTAAAGTGTCCTCTCCATGAATCATAG 1563 0.4395 MEFVLQFVHPSTILFLLLPISVFFVVFIPYLWKKLPYPPGPKGLPIVGNLFMMDQLTHRGLAQLAKQYGGLCHLRMGMLHIVAVSTPEMAREVLQAQDGDFSNRPANVAITYLTYDRADMAFANYGPFWRQMRKICVMKLFSRKRAESWASVREEVEGMVQTVASKIGSPINLGAMIFALTRSITFKAAFGASLNEGQEEFMKILQEFSKLFGAFNIADFIPWLGWFHAQEFNKRMANARQALDVFIDQIIDDHMSKRKNMKQKSVENEVDSDMVDELMVFLYEKDGDTTHSDNPPLMLKLTRDNIKALIMDVMFGGTETVASVVEWTLAELMKSPVDLEKVQQELLDVVGLGRRFNEFDLEKLTYLKCAIKETLRLHPPIPLLLHEAAKDSVLAGYAIPKGTRVWINAWAIGRDEMAWDEPEKFNPSRFLNDDMPDFKGGNFEFIPFGSGRRSCPGMQLGLYAVEMAAAHLLHCFKWELPNGMKPSELDMNDVFGLTAPRAVQLVAVPSYRLKCPLHES* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0350 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Apr5g0350 520 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0350 520 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0350 520 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0350 520 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0350 520 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0350 520 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0350 520 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0350 520 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0350 520 Gene3D Cytochrome P450 32 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0350 520 PANTHER CYTOCHROME P450 84A1-RELATED 1 518 - -
Apr5g0350 520 Pfam Cytochrome P450 38 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0350 520 SUPERFAMILY Cytochrome P450 38 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0350 520 Coils Coil 229 249 - -
Apr5g0350 520 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0350 520 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0350 520 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0350 520 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 1 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0350 Apr-Chr5 3278219 3280843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0350 45 517 Monolignol Biosynthesis Gene Families AT4G36220 67.442 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0350 K09755 - zju:107426594 755.362