Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0348 ATGCTGGCAGTGGTGGTGGACCAAGTACTTAGTGGGTTTCTCAGGCAGTGGCATCTACAAACTGTCCACATTGTGTATATGGGTGACAGAAGCCGTGGCCAGAGTGAGCAACAGTTAGTTGAAGATTCATACCTTGACATACTATCACATATTCTTGGAAGCAAAAGCGCTGCTAGGAAGTCCATCTTGTATAGCTATAAGCATGGCTTTTCTGGATTTGCTGCAGTTTTAAGTCAGTCTCAAGCTAAGCTCATTGCAGATATCCCAGGGGTTGTACGTGTGATTCCGAATAAAATTCTTAGTCTTCACACAACAAGAAGTTGGGATTTCTTGCACGTAAAGCAGGATATAGTAACTGGTGTTCTTACTAGGGGTCAATCTGGAAGAGGCACCATCGTTGGGGTCATAGACACTGGTATTTGGCCTGAGTCTGAGAGCTTTAGAGATGATCACATGGATAATCCTCCTCCTCGGTGGCGTGGTATTTGCCAAGGAGGACAAAACTTTGACCACTCCCACTGCAATAGGAAAATTATTGGGGCACGTTGGTATATTAAAGGATATGAAGCTGAATTTGGTAAACTAAATACAAGTGATGGGGTAGAGTACTTATCTCCTCGAGATGCAACAGGCCATGGCACTCACACGTCATCTACTGCAGCTGGTGTTCCAGTAGAAAATGCAAGCTTTAGGGGACTAGCTAAAGGGTTGGCAAGAGGTGGTGCTCCAAAAGCTTGGTTAGCTATCTACAAAATTTGTTGGTCTACTGGGGGATGCAGTTCTGCTGATCTTCTAGCAGCATTTGATGATGCAATATTTGATGGGGTTGACATTCTTTCAGTGTCTCTTGGCTCATCTCCTCCACCTCCAACTTATGTAGACGATGCGTTGGCCGTTGGTTCTTTCCATGCTGTAGCTAAAGGAATTTCTGTGGTATGCTCTGGGGGCAATTCTGGCCCATATTCTCAAACTGTCATAAACACTGCCCCTTGGATTATTACCGTTGCTGCCAGTACCATGGACAGAGAATTCCCTTCTGTAATTGTCCTGGGAAACAATCAAACTCTACAGGGTCAGAGTTTATATACAGGGAAAGATTTGAGCAAGTTTTATCCTATTGTTTATGGAGAAGACATAGCAGCTTCGGGTGCAGATGAAGAAAATGCAAGGAGCTGCGATTCAGGAAGCCTGAATGCAACCTTAGCTAAAGGAAAAGTAATCCTATGTTTCCAGTCTAGGTCACAGAGGTCATCCACAGTTGCTGTAAGAACTGTAGTGGAAGTTGGTGGCGCTGGTCTCATATTTGCTCAGTTTCCAATTAAAGATGTCGAAATATCGTCGAGTAAGCCCTGTGTCCAAATTGACTTCATAGCGGGAACAACTATTTTATCATACATGGAAGCATCTAGGAATCCTATAATCAAGTTTAGCAAGAACAAAACAATTGTGGGGCAACAGATATCCCCGGAAGTGGCATTATTCTCTTCGCGAGGACCAAGTTCTGTATCTCCTTCAGTGTTGAAGCCTGATATAGCTGCTCCTGGGGTCGACATTCTAGCAGCCTGGTCACCTGCTTCTTCTGCCCAGTTGCTATCTGATGCAAATCAAGATGAGTTTCCTCCCCTTAACTTCAACATTGAATCAGGAACTTCCATGGCATGCCCCCACATATCTGGTATCGTAGCACTTATAAAGACTATCCATCCAACTTGGAGCCCTGCTGCTATTAAATCTGCACTTGTCACAACAGCTTCTCTGAAAAATGAATACAACGAGTACATTGGGGCTGAAGGAGCACCACATAAACAGGCTGACCCATTTGACTATGGGGGTGGTCACGTTGATCCCAACAAAGTGACAGATCCTGGACTCGTATATGACTTGGAAAACTCAGACTACGTTCGTTTCCTCTGTTCTATGGGCTACAATGACACTGCAGTAAGGTTATTAACAGGCTCTCCTACTAGGTGCCGTAAATCACCCAAGTTCTTATTAAACATGAACCTGCCTTCTATTATTATTCCCGAGCTGAAGCAACCTTTGACAGTATCAAGAACAGTCACTAATGTTGGCCCAACTAGCTCTGTCTACACTGCCCGTGTTGTAGCTCCAATTGGTATCTCGGTGACAGTTGAGCCCCCAATCTTAATATTTAGTTCTAAAACAAAGAAAATGAAACTCAATGTGACATTTTCTTCGAAGCTACGAATTCAAAGCGGGTTCTCATTTGGGTACCTGTACTGGGAAGATGGGTCACATGAAGTCAGGATACCGTTGGCAGTTCGCTCTGTAGTGGATGAATTTTGTGCAGAAACATAA 2319 0.4407 MLAVVVDQVLSGFLRQWHLQTVHIVYMGDRSRGQSEQQLVEDSYLDILSHILGSKSAARKSILYSYKHGFSGFAAVLSQSQAKLIADIPGVVRVIPNKILSLHTTRSWDFLHVKQDIVTGVLTRGQSGRGTIVGVIDTGIWPESESFRDDHMDNPPPRWRGICQGGQNFDHSHCNRKIIGARWYIKGYEAEFGKLNTSDGVEYLSPRDATGHGTHTSSTAAGVPVENASFRGLAKGLARGGAPKAWLAIYKICWSTGGCSSADLLAAFDDAIFDGVDILSVSLGSSPPPPTYVDDALAVGSFHAVAKGISVVCSGGNSGPYSQTVINTAPWIITVAASTMDREFPSVIVLGNNQTLQGQSLYTGKDLSKFYPIVYGEDIAASGADEENARSCDSGSLNATLAKGKVILCFQSRSQRSSTVAVRTVVEVGGAGLIFAQFPIKDVEISSSKPCVQIDFIAGTTILSYMEASRNPIIKFSKNKTIVGQQISPEVALFSSRGPSSVSPSVLKPDIAAPGVDILAAWSPASSAQLLSDANQDEFPPLNFNIESGTSMACPHISGIVALIKTIHPTWSPAAIKSALVTTASLKNEYNEYIGAEGAPHKQADPFDYGGGHVDPNKVTDPGLVYDLENSDYVRFLCSMGYNDTAVRLLTGSPTRCRKSPKFLLNMNLPSIIIPELKQPLTVSRTVTNVGPTSSVYTARVVAPIGISVTVEPPILIFSSKTKKMKLNVTFSSKLRIQSGFSFGYLYWEDGSHEVRIPLAVRSVVDEFCAET* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0348 772 Gene3D Peptidase S8/S53 domain 130 633 IPR036852 GO:0004252|GO:0006508
Apr5g0348 772 Pfam Peptidase inhibitor I9 22 103 IPR010259 -
Apr5g0348 772 Gene3D - 341 483 - -
Apr5g0348 772 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 103 IPR037045 -
Apr5g0348 772 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 761 IPR045051 -
Apr5g0348 772 SUPERFAMILY Subtilisin-like 102 624 IPR036852 GO:0004252|GO:0006508
Apr5g0348 772 CDD Peptidases_S8_3 102 585 IPR034197 -
Apr5g0348 772 Pfam Fibronectin type-III domain 666 761 IPR041469 -
Apr5g0348 772 PANTHER OS09G0530800 PROTEIN 34 761 - -
Apr5g0348 772 CDD PA_subtilisin_like 347 475 - -
Apr5g0348 772 PRINTS Subtilisin serine protease family (S8) signature 128 147 IPR015500 -
Apr5g0348 772 PRINTS Subtilisin serine protease family (S8) signature 208 221 IPR015500 -
Apr5g0348 772 PRINTS Subtilisin serine protease family (S8) signature 548 564 IPR015500 -
Apr5g0348 772 ProSiteProfiles Serine proteases, subtilase domain profile. 107 620 - -
Apr5g0348 772 Pfam Subtilase family 128 588 IPR000209 GO:0006508|GO:0008236
Apr5g0348 772 Gene3D - 637 765 - -
Apr5g0348 772 ProSitePatterns Serine proteases, subtilase family, serine active site. 549 559 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0348 Apr-Chr5 3253075 3259495 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0348 22 765 Subtilisin-like Serine Gene Family AT1G32960 46.950 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0348 - - gmx:100775442 1279.23