Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0334 ATGGGAGAGGTGGCGCGTGGAGGTTGTTGCCCTCCGATGGATCTGTTCCGTTCGGAGCCGATGCAACTGGTTCAGCTCATCATCCCCATCGAATCCGCTCACCGCACCGTCTCCTACCTCGGCGACCTTGGCCTCCTTCAGTTCAAAGATCTCAATGCAGATAAGAGCCCTTTTCAACGGACTTATGCAGCTCAGATAAAAAGGTGTGGAGAGATGGCTCGTAGATTGCGTTTTTTCAAGGAGCAAATGTTGAAGGCAGGTGTTTCACCAAAATATTCCACAATACCAGCTGGTGTGAACATTGATGACCTTGAGGTGAAACTTACAGAAATTGAGTCAGACTTAATTGAGATGAATGCAAATGGTGAAAAATTGCAGCGCTCATACAATGAACTTGTGGAGTATAAGCTTGTTCTGCAGAAGGCTGGGGAATTTTTTGTCTCAGCTCAAAGTCGTGCCATAGAGCAGCAGAGAGAATATGAATCACGTCATCTGAGTGGTGAATCGATGGAAACACCTTTGTTACAGGACCAAGAATTGACAGGTGATTCATCAAAGCAAGTTAAGTTGGGATTTTTAGCAGGTCTTGTTCCCCGGGAGAAGTCCATGACATTTGAGAGAATTTTATTTCGAGCCACTAGAGGAAATGTATTTTTGAGGCAGGCTACTGTTGAGGATCCTGTCATAGACCCTGTTTCTGGAGAAAAGACTGAGAAAAATGTGTTTGTGGTCTTCTATGCTGGTGAAAAAGCAAAAGCCAAGATTCTGAAAATATGTGAAGCCTTTGGTGCTAATCGTTATCCTTTTGCTGAAGAACTTGGAAAACAAGCTCAAATGATTACAGAGGTTTCTGGAAGACTTTTAGAATTGAAGACCACTATAGATGCTGGACTCTTGCACCGCGACAACTTGTTAAATACTATTGGGGCTCAGTTTGAGGAATGGGATCTATTGGTGAAAAAGGAGAAATCTATTCACCATACCTTGAACATGCTAAGCCTTGATGTGACGAAAAAATGTCTTGTGGCTGAGGGGTGGAGTCCTGTTTTTGCATCTAAGCAGATACAGGATGCATTACAGCGGGCAGCATTTGATTCTAATTCTCAAGTCAGTGCCATTTTTCAAGTTTTGCATACTAGGGAGTTGCCACCTACCTATTTTCGCACAAACAAATTTACTTCTTCATATCAAGGAATTATTGACTCATATGGGGTTGCTAAGTATCAGGAGGCAAATCCTACTGTGTATACTGTGGTCACCTTTCCATTTCTTTTTGCTGTAATGTTTGGTGATTGGGGGCATGGAATTTGTTTACTGCTGGCAGCTCTATATTTCATACTAAGGGAGAGGAAGCTTTCTAGCCAGAAGCTTGACGACATCACAGAAATGACTTTTGGAGGTCGCTATGTTATTTTGTTGATGGCACTCTTCTCAATTTACACTGGCTTTATCTATAACGAGTTCTTTTCTGTCCCATTTGAAATCTTTGGTCCCTCTGCATATGAATGTCGTGACCTTTCTTGCAGGGACGCTACAACAGTGGGCCTGATAAAAGTGCGTCGCACTTACCCTTTTGGAGTGGATCCTGTATGGCATGGTACTCGAAGTGAACTACCATTCTTGAACTCTTTGAAGATGAAAATGTCAATTCTTCTCGGAGTTGCTCAAATGAACCTTGGAATTATAATGAGCTATTGCAATGCCAAATTCTTCAAGAACAATGTAAACGTGTGGTTCCAATTTATTCCCCAAATGATATTTCTGAACAGTCTGTTTGGTTACCTATCCCTTCTAATCATTGTCAAGTGGTGCACTGGTTCTCAAGCTGACTTGTACCATATAATGATCTACATGTTCCTGAGCCCAACAGATGAGTTGGGGGAGAACCAACTCTTTGTTGGCCAGAAAAATCTACAGCTTGTGCTTTTGCTTCTGGCTTTTGTCTCTGTGCCCTGGATGCTATTGCCAAAACCCTTTATTCTGAAGAAGCAACATGAAGCGAGGCATGGGGTTGAATCCTATACACCACTTCAAAGTGCAGACGAGAGCTTGCAAGTTGAGTCAAATCATGATTCTCATGGTCATGCGGAATTTGAGTTCAGTGAAGTCTTTGTTCATCAACTCATACACACCATAGAGTTTGTACTTGGAGCAGTCTCTAATACAGCTTCCTACCTCCGTCTATGGGCCCTTAGTCTTGCTCATTCAGAGTTATCAAGTGTATTCTACGAGAAGGTTCTGATGATGGCATGGGGGTACAATAATGTGATTATCCTGATAGTGGGTCTCATTGTCTTCATTTTTGCTACCGTTGGAGTGTTACTTGTCATGGAAACTCTGAGTGCCTTCTTACATGCGTTACGACTTCACTGGGTGGAGTTCCAAAACAAGTTTTATGAGGGCGATGGTTACAAGTTTCACCCTTTCGCGTTCTCATTGCTAGACGATGAGGAATGA 2457 0.4265 MGEVARGGCCPPMDLFRSEPMQLVQLIIPIESAHRTVSYLGDLGLLQFKDLNADKSPFQRTYAAQIKRCGEMARRLRFFKEQMLKAGVSPKYSTIPAGVNIDDLEVKLTEIESDLIEMNANGEKLQRSYNELVEYKLVLQKAGEFFVSAQSRAIEQQREYESRHLSGESMETPLLQDQELTGDSSKQVKLGFLAGLVPREKSMTFERILFRATRGNVFLRQATVEDPVIDPVSGEKTEKNVFVVFYAGEKAKAKILKICEAFGANRYPFAEELGKQAQMITEVSGRLLELKTTIDAGLLHRDNLLNTIGAQFEEWDLLVKKEKSIHHTLNMLSLDVTKKCLVAEGWSPVFASKQIQDALQRAAFDSNSQVSAIFQVLHTRELPPTYFRTNKFTSSYQGIIDSYGVAKYQEANPTVYTVVTFPFLFAVMFGDWGHGICLLLAALYFILRERKLSSQKLDDITEMTFGGRYVILLMALFSIYTGFIYNEFFSVPFEIFGPSAYECRDLSCRDATTVGLIKVRRTYPFGVDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIIMSYCNAKFFKNNVNVWFQFIPQMIFLNSLFGYLSLLIIVKWCTGSQADLYHIMIYMFLSPTDELGENQLFVGQKNLQLVLLLLAFVSVPWMLLPKPFILKKQHEARHGVESYTPLQSADESLQVESNHDSHGHAEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLMMAWGYNNVIILIVGLIVFIFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFHPFAFSLLDDEE* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0334 818 PANTHER VACUOLAR PROTON ATPASES 5 818 IPR002490 GO:0033179|GO:0046961|GO:1902600
Apr5g0334 818 PIRSF ATP6V0A1 11 818 IPR026028 GO:0000220|GO:0046961
Apr5g0334 818 Pfam V-type ATPase 116kDa subunit family 39 811 IPR002490 GO:0033179|GO:0046961|GO:1902600
Apr5g0334 818 Coils Coil 101 121 - -
Apr5g0334 818 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 5 818 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0334 Apr-Chr5 3065960 3076231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0334 13 818 Primary Pumps ATPases(2) AT4G39080 78.342 0.0 1306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0334 K02154 - gmx:100810062 1516.52