Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0331 ATGGTTAAGAGAATGGTTCCAAGGAAGGTTGGTATCCAAGCTGATCATGTCAAATTTGATAAGCATTTGGCACTCCTGAAGTCATCTTCCTCTCAGCACCAAGACGGCAAAAGCAAAGGATTTGATAAGATGAATGAAATGAAGGAGTCCAGGTCAATTAAGCGTTCTGATTTGGAGCATCCTCAATCACCACCTTCAGTCAAGAGCTTATTCCAATCAAGACAAGCACCACTTCTTCATGTTCCAACAATTGCTGCACTACCACAACAGCAGAAGCCGTTGGTGAGAAGGTCACCAAATTACATGAAACCTACAACCAGTTCAGATGCAAAAAAGGAGCTTTTGCTGGTGAGTCTTCAGAATACTCCATCCGGTTCAAATGGTAAGAATCCACCACGAAAATGCTCGAGTATTTCAAAAGCTACCAATGTTTCTAGCAAAGATCCTGCAAATACTTTGTCAAGATCATCTAGTTTGAATTCGGTGAGAACATTGACAAAGAGTCCAAGTTTTATGCCTTGTAAAGCTTGTTCGAGAAAATCTACTTCAGCAGTTTTGTTTGAAGATATGAATGCACCAGATAAAGCTACCTGCTCTTCAACTTTGAAAGACTCAAAGTTCCCTGCATACCTCACGCTTCATCCTGGGGGAACCGAGTCTGAGGGAGCTTCAGTCATGAAGGTTTGCCCATATGCATATTGTTCTCTTAATGACCATGGTCATGCTTCTTTGCCTCCATTGAAGAGCTTCATGTCAGCAAGGAGGCATCTTTTGGAGACTCAGAAGAATATAAAGCCAGAAGTTGTGAGCCCTCGGAGATTGAAGGTGCCACGTGATACAAAAGAAGACTCTGATATTGAGCAAGTTGTCCTTGATGGAAAACTTCCACGTGATGAAGCTGATAAGGGTAACCCAATAATCACTTCCTTGGTACAAGAAATTGATAGGGATTTCTTTATTGAAATTTATGATGAGGAAAAGGAACGAGCTGACAAAATGGGAAGATTCAACTCTGTCAAAGACCTTGAGGATAAAAAAGATATGGTTATTGCAAACGAGAAGAATGGCACTGCAGCAGAAGAGAATGACATCAAGCAAGTTATTCCAGTTGAAGCAGATAGCAAGGGGAGCTTTCACTTAGAACAAAATGCTGAAGATGCCGATGAAAACCACCCACCTGGCGGGTTTCATGAAGAAACCTGTACGAGAAGCTACTGCGATGGGAAACACCAGGAGAATATTGAATTGGATGAGTCCGATTCCCAGTACACTGATATGGACTGGGAGGAGGAAAAATTCCGTGAATTCAACTATGAAGAGGATATTGGTTCTTCCATCCGCTCGATGGATGAGACTGGCTCAAAACTTGAGTCTTTATCAGAGTGTTCGCATGATACGTGTGAAATGTGGTTAGATGACATCTTTAGCAGCCATGACGAAGACATTCTTGTTGAAAAGACACCCCAAGAAGCCGAAGAAAAGAAAAGCACATGTTTTGAACCACAACATCATTGCACTAATTTTGTCCAAGAAGGAACCAATGAAAGCATCGAGTTGGATACTCAAGAAAAAGAATATCCATCCAACAATATGAGTTTTGAGTATAACCAATATACTTTGACAGAGGAAGTATTTCAGAATAACACAGATGCAGGAGATAACAGTAGAGAAAACGATAAATATGTGGATTACGAGGCCAGTTGTGTCTCAATGGTACTTGATGCAGCCACAGTTGTCAATAGTGAAGGCCACAAGACTAGTGACACTTGCAAGATTGATGATAGCCAAGACAGCAAAGTAAGCCAAGAGAATAATGATGATAAAATAAGGCAGAATATATTGGAGGAAAATCAAGTTAAATCTAGTAAGTTTCAGAGCAGAAGCTGCACGGGTGGTGAAGAGCAGCATACAAGCAAGAAGTGGCAATGTGCAACTAAGCGCAAGAGGCCTATGGAAGATGATGAGGAAATGAGAAAGATCAATCCCCGAAAGCCGAATTTGCTGCCCATGGCTCCTGACCCAGAACCACAGAAGGTTGACCTGAAGCACCAAATGATAGATGAAAGAAAAAACGCAGAGGAATGGATGCTTGATTTTGCACTCAGACAAACTGTCACAAGACTTGCTCCAGCAGGGAAAAAGAAGGTGGCATTACTAGTTGAAGCTTTTGAAACAGTAATGTCAATACCTAAATGTGAAACTCGCATGAGAAATGATTCACCCTTTGCTCATGCAAGACCTATTCAAGCATGTAGCTGA 2259 0.4148 MVKRMVPRKVGIQADHVKFDKHLALLKSSSSQHQDGKSKGFDKMNEMKESRSIKRSDLEHPQSPPSVKSLFQSRQAPLLHVPTIAALPQQQKPLVRRSPNYMKPTTSSDAKKELLLVSLQNTPSGSNGKNPPRKCSSISKATNVSSKDPANTLSRSSSLNSVRTLTKSPSFMPCKACSRKSTSAVLFEDMNAPDKATCSSTLKDSKFPAYLTLHPGGTESEGASVMKVCPYAYCSLNDHGHASLPPLKSFMSARRHLLETQKNIKPEVVSPRRLKVPRDTKEDSDIEQVVLDGKLPRDEADKGNPIITSLVQEIDRDFFIEIYDEEKERADKMGRFNSVKDLEDKKDMVIANEKNGTAAEENDIKQVIPVEADSKGSFHLEQNAEDADENHPPGGFHEETCTRSYCDGKHQENIELDESDSQYTDMDWEEEKFREFNYEEDIGSSIRSMDETGSKLESLSECSHDTCEMWLDDIFSSHDEDILVEKTPQEAEEKKSTCFEPQHHCTNFVQEGTNESIELDTQEKEYPSNNMSFEYNQYTLTEEVFQNNTDAGDNSRENDKYVDYEASCVSMVLDAATVVNSEGHKTSDTCKIDDSQDSKVSQENNDDKIRQNILEENQVKSSKFQSRSCTGGEEQHTSKKWQCATKRKRPMEDDEEMRKINPRKPNLLPMAPDPEPQKVDLKHQMIDERKNAEEWMLDFALRQTVTRLAPAGKKKVALLVEAFETVMSIPKCETRMRNDSPFAHARPIQACS* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0331 752 SMART CaM_binding_2 616 728 IPR012417 GO:0005516
Apr5g0331 752 MobiDBLite consensus disorder prediction 93 161 - -
Apr5g0331 752 MobiDBLite consensus disorder prediction 586 606 - -
Apr5g0331 752 MobiDBLite consensus disorder prediction 26 71 - -
Apr5g0331 752 Pfam Plant calmodulin-binding domain 633 728 IPR012417 GO:0005516
Apr5g0331 752 MobiDBLite consensus disorder prediction 619 656 - -
Apr5g0331 752 MobiDBLite consensus disorder prediction 36 58 - -
Apr5g0331 752 MobiDBLite consensus disorder prediction 639 656 - -
Apr5g0331 752 PANTHER PLANT CALMODULIN-BINDING-LIKE PROTEIN 611 752 - -
Apr5g0331 752 PANTHER PLANT CALMODULIN-BINDING-LIKE PROTEIN 1 369 - -
Apr5g0331 752 PANTHER PLANT CALMODULIN-BINDING-LIKE PROTEIN 370 611 - -
Apr5g0331 752 MobiDBLite consensus disorder prediction 90 161 - -
Apr5g0331 752 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 370 611 IPR044681 GO:0005516
Apr5g0331 752 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 369 IPR044681 GO:0005516
Apr5g0331 752 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 611 752 IPR044681 GO:0005516
Apr5g0331 752 MobiDBLite consensus disorder prediction 619 638 - -
Apr5g0331 752 MobiDBLite consensus disorder prediction 581 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0331 Apr-Chr5 3056102 3059138 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0331 633 752 Calmodulin-binding Proteins AT2G38800 46.667 6.55e-27 114