Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0329 ATGAGAACCCGTGCGTGTAACATGCTAATAATGTGTGTTACCTTCGTATGGTTGCGCGTGGCAGCGTGCTCTTCATTCAGCGACATGGAAGCGCTGCTAAAGCTGAAGGACGCCATGAAGGGAGACAAAGCCCAAGACCACGCGCTCCAAGACTGGAAGTTTTCCACGTCACTCTCTGCCCACTGTTCATTCTCCGGCGTAACATGCGATCGGGACCTCCGTGTCGTTGCTCTGAACGTGTCGTTTATTCCGCTCTTCGGCCATATTTCGCCGGCCATCGGAGACTTGGACAAGTTGGAGAATCTCACCATCGTCAAGGACAATCTCACCGGAGAACTTCCACCGGAGCTTGCCGGCCTCACTTCCCTCAAAATCCTCAACATCTCCCACAACCTCTTCTTCGGCCATTTCCCCGGCAACATCACTCTCCCGATGACTCAACTCGAGGTCCTCGATGCCTATGACAACAACTTCACGGGACCACTTCCCGAAGAAACCGTCGAATTGGAAAACCTCAGGTACCTCCGGCTCGCCGGAAACTATTTTAACGGCAGCATACCAGAGATTTATTCGGAGTTCGCCAGCTTGGAGTATTTGGGCTTAAGCACCAACAGTCTAACGGGGAAGATTCCCAAGAGTTTGGCTCGGCTGAGGACGCTTAAGGAACTGTATCTCGGCTACAACAACGCTTACGAAGGTGGAATCCCACCGGAGTTAGGCACCATGGAATCTCTGAAACTGCTGGACTTGTCAAGCTGCAACCTCAGCGGCGAGATTCCACCGAGCCTGAGCAATTTAACGAACCTTCACACCTTGTTCCTGCAAATGAACAACCTCACCGGAACCATTCCGCCGGAGCTCTCTGCCATGGCGAGCCTCATGTCGCTAGACCTCTCCATCAACGGCCTTACCGGCGAGATTCCAGAGAGTTTCTCTCGGCTTCAGAACCTCACTCTGATGAACTTCTTCCAGAACAAGCTTCGCGGCCCCGTTCCGTCCTTCGTCGGTGAGCTTCCGAACCTGGAAGCGCTCCAGCTCTGGGAAAACAACTTCTCCTTCGTGCTACCGCAGAACCTTGGGCAAAATGGGAAATTCAAGTTCTTCGACGTCACCAAGAATCACTTCACGGGGTTGATACCTCAGGACTTGTGCAAAAGTAGGAGGTTGCAAACGTTCATGCTCACCGATAACTTCTTCTACGGCCCGATCCCCAAGGACATTGGTAACTGTAACTCCCTCCTCAAAATTCGAGCCTCCAATAACTACCTCAACGGTGAGCTTCCCCCTGGAATTTTCAAACTACCTTCCGTTACCATAATCGAGCTCGCCAATAACCGTTTCACCGGCCAACTACCTCCCGATATTTCCGGAGATTCTCTTGGGATTCTAACTGTTTCTAACAACCTTCTGACGGGGAAAATCCCCCCTGCTTTGGAAAACCTCAGGGGATTGCAGACCCTGTTCCTTGACGCCAACGAGTTCGTTGGGGAAATCCCAGGGGAAGTCTTTGACTTACCAATGCTCACCAAGTTCAACGTTAGCGGCAACAACCTCACCGGTCCAATCCCGACGACGTTCACTGGCTGTGTTTCTCTTAGCGCCGTAGACCTCAGCCGGAACATGCTCGTCGGCGAGGTTCCGAATGGAATGAAGAACCTGAAGGACTTGAGCATTCTGAACGTGTCGAGGAACTACATATCGGGTCCAGTCCCCGACGAGATTCGCTTCATGACCAGCCTCACCACCCTCGACCTCTCCTACAACAACTTCATGGGCAAGATCCCCAGCGGGGGACAGTTCTATGTCTTCAACGAAAAGTCGTTTACGGGGAACCCCAACCTCTGTTCCTCCCGCCAACCATCCTGCCCTAATTCCCTAATGTACCCAGACGACACAGCGAGGAAGAGGCGCAGTTCCAAAACGACCAAGGTTATCGTGATTGTGATTGCAGGGGGAACCGCATTGGTGCTGGTAGCGGTGACGGTGTACATGACGAGAAAGAGGAGGGAGCAGAGAGCGATGGCGTGGAAGCTAACGGCGTTCCAGAGGCTTAACTTGAAGGCGGAGGAAGTGGTGGAGTGTCTGAAGGAAGAGAACATAATAGGAAAAGGAGGAGCGGGAATCGTGTACAGAGGATCGATGGGAAACGGAACGGAGATAGCAATAAAGAGGTTGGTAGGAGAAGGAAGTGGGAAAAACGATTACGGATTCAAAGCGGAGATAGAAACGTTAGGGAAAATAAGGCACAGGAACATAATGAGGCTTCTCGGGTACGTGTCGAACAAGGAGAGTAACTTGTTGCTGTACGAGTACATGCCAAATGGAAGCTTAGGGGAATGGCTGCATGGGGCGAAGGGTGGGCATTTGAGGTGGGATATGAGATATAGAATTGCGGTGGAAGCAGCGAAAGGACTATGCTATTTGCACCATGATTGTTCCCCTCTCATAATTCACAGGGACGTCAAGTCCAACAACATCTTGCTGGACTCGGACTTGCAGTCCCATGTGGCTGATTTTGGGCTGGCGAAGTTCCTATATGACCCAGGAGCCTCTCAGTCGATGTCCTCCATCGCAGGGTCCTACGGCTACATTGCTCCCGAGTATGCTTACACGCTTAAGGTGGACGAGAAAAGTGACGTGTACAGCTTCGGCGTGGTCCTGCTGGAGCTCATCATTGGGAGAAAGCCCGTGGGTGAGTTTGGAGATGGAGTCGACATCGTTGGATGGGTCAATAAGACTAGATTGGAGCTCTCTCAGCCGTCCGATGCAGCTTTGGTTCTTTCTGTTGTGGACCCACGCCTCTCTGGTTACCCCTTGACAAGTGTCATTCACATGTTCAACATTGCCATGATGTGTGTCAGAGAAATGGGCCCCGCTAGGCCCACCATGAGGGAAGTCGTTCATATGCTCACTAATCCTCCTCACCCTCCCACTCCCACCCTCATCAATCTCTAA 2955 0.5201 MRTRACNMLIMCVTFVWLRVAACSSFSDMEALLKLKDAMKGDKAQDHALQDWKFSTSLSAHCSFSGVTCDRDLRVVALNVSFIPLFGHISPAIGDLDKLENLTIVKDNLTGELPPELAGLTSLKILNISHNLFFGHFPGNITLPMTQLEVLDAYDNNFTGPLPEETVELENLRYLRLAGNYFNGSIPEIYSEFASLEYLGLSTNSLTGKIPKSLARLRTLKELYLGYNNAYEGGIPPELGTMESLKLLDLSSCNLSGEIPPSLSNLTNLHTLFLQMNNLTGTIPPELSAMASLMSLDLSINGLTGEIPESFSRLQNLTLMNFFQNKLRGPVPSFVGELPNLEALQLWENNFSFVLPQNLGQNGKFKFFDVTKNHFTGLIPQDLCKSRRLQTFMLTDNFFYGPIPKDIGNCNSLLKIRASNNYLNGELPPGIFKLPSVTIIELANNRFTGQLPPDISGDSLGILTVSNNLLTGKIPPALENLRGLQTLFLDANEFVGEIPGEVFDLPMLTKFNVSGNNLTGPIPTTFTGCVSLSAVDLSRNMLVGEVPNGMKNLKDLSILNVSRNYISGPVPDEIRFMTSLTTLDLSYNNFMGKIPSGGQFYVFNEKSFTGNPNLCSSRQPSCPNSLMYPDDTARKRRSSKTTKVIVIVIAGGTALVLVAVTVYMTRKRREQRAMAWKLTAFQRLNLKAEEVVECLKEENIIGKGGAGIVYRGSMGNGTEIAIKRLVGEGSGKNDYGFKAEIETLGKIRHRNIMRLLGYVSNKESNLLLYEYMPNGSLGEWLHGAKGGHLRWDMRYRIAVEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDLQSHVADFGLAKFLYDPGASQSMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIIGRKPVGEFGDGVDIVGWVNKTRLELSQPSDAALVLSVVDPRLSGYPLTSVIHMFNIAMMCVREMGPARPTMREVVHMLTNPPHPPTPTLINL* 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0329 984 Gene3D Ribonuclease Inhibitor 27 143 IPR032675 -
Apr5g0329 984 Pfam Protein tyrosine and serine/threonine kinase 696 969 IPR001245 GO:0004672|GO:0006468
Apr5g0329 984 Pfam Leucine rich repeat 482 542 IPR001611 GO:0005515
Apr5g0329 984 Pfam Leucine rich repeat 171 229 IPR001611 GO:0005515
Apr5g0329 984 Gene3D Transferase(Phosphotransferase) domain 1 772 975 - -
Apr5g0329 984 SMART serkin_6 695 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0329 984 Gene3D Phosphorylase Kinase; domain 1 658 771 - -
Apr5g0329 984 PANTHER UNNAMED PRODUCT 8 977 - -
Apr5g0329 984 Gene3D Ribonuclease Inhibitor 231 333 IPR032675 -
Apr5g0329 984 Pfam Leucine rich repeat N-terminal domain 27 70 IPR013210 -
Apr5g0329 984 SUPERFAMILY Protein kinase-like (PK-like) 686 970 IPR011009 -
Apr5g0329 984 PANTHER RECEPTOR PROTEIN KINASE CLAVATA1 8 977 - -
Apr5g0329 984 ProSiteProfiles Protein kinase domain profile. 695 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0329 984 Coils Coil 678 698 - -
Apr5g0329 984 SUPERFAMILY L domain-like 379 617 - -
Apr5g0329 984 Gene3D Ribonuclease Inhibitor 334 627 IPR032675 -
Apr5g0329 984 SMART LRR_typ_2 481 505 IPR003591 -
Apr5g0329 984 SMART LRR_typ_2 338 362 IPR003591 -
Apr5g0329 984 SMART LRR_typ_2 242 265 IPR003591 -
Apr5g0329 984 SMART LRR_typ_2 266 290 IPR003591 -
Apr5g0329 984 SMART LRR_typ_2 577 600 IPR003591 -
Apr5g0329 984 SMART LRR_typ_2 169 192 IPR003591 -
Apr5g0329 984 SMART LRR_typ_2 120 144 IPR003591 -
Apr5g0329 984 SMART LRR_typ_2 434 458 IPR003591 -
Apr5g0329 984 SUPERFAMILY RNI-like 78 421 - -
Apr5g0329 984 Pfam Leucine Rich repeat 578 589 IPR001611 GO:0005515
Apr5g0329 984 Pfam Leucine Rich Repeat 244 266 IPR001611 GO:0005515
Apr5g0329 984 Gene3D Ribonuclease Inhibitor 144 230 IPR032675 -
Apr5g0329 984 ProSitePatterns Serine/Threonine protein kinases active-site signature. 816 828 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0329 Apr-Chr5 3027746 3031652 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0329 21 974 Receptor kinase-like Gene Family AT1G75820 61.546 0.0 1223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Apr5g0329 PK_Tyr_Ser-Thr 3.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0329 K00924 - gmx:732625 1606.27