Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0328 ATGCCCATGTTATCTAAGGAGAGTAATATTATTCTTACTCAGAATCAATCTATCCAAGATGGTGAGACCCTGGTCTCAGCAGGGGGAACCTTTGAGGCAGGATTCTTCAACTTTAAAAATTCAAAATACCAATACTTTGGTATATGGTACAAGAACATATCACCTAGGACAATTTTGTGGGTAGCCAACAGAGACACCCCAGTTGAAAACTCTACAGCAATTTTGAATCTTACATCACAAGGAAATTTTTTTATTTTTGATGGCTCAAAGGGTATAATATGGTCCTCCATCACATCAAGAACTGGAGAGAAACCCTTCATGCAGCTTTTAGACTCAGGAAACCTTGTTGTGAAAGATGGAGACAAGGGAGAGAACCTTTTGTGGGAAAGCTTTGATTATCCTGGGGACACTTTCCTTGCAGGAATGAAGATTAAGAGCAACTTAGAAACTGGTCCATATAGGTCTCTAACATCTTGGAGGAGCACAGAAGACCCTGCTGGTGGGGAGTTTTCATTTCACATAGATATTTGTGGCTTTCCTCAATTAGTTGTTACTAAAGGAGCAAATGTAATTATCAGAGCAGGCCCATGGATTGGCCAATATTTTTCAGGAGCTTCTTTGCTAAGAGTTCAGAAATTCTTGAAATACTCTTTGCTGTTTACTGACAATGAAATCTCTTATGGATATGAAACCATGAACAGTTCAGTTATTACTAGAGCAGTGCTCAACCCATCAGGCATTACACAACGTTTGATTTGGTCAGACGAGACTAGAAGTTGGGAGATTGTATCTACTCACCCCGGCGATCAGTGTGAATACTATGCCTTTTGTGGTGCTAACTCAAATTGTGATGTTGCTAACAATCCAATATGTGAATGCTTGGAAGGGTTCAGTCCTAAATTTCAAGCAAAATGGAGTTCATTAGATTGGGCTGACGGATGTGTTCCGATGAAAGATTTAAGTTGTGTGAATGAAGATGGTTTTCTCAAATACTCAGGAATGAAGTTGCCAGACACGTCTTCTTCATGGTTTGGCAAGATAATTTTTGAAAATCACAAAAGGGATAAGAGGAACTTTAATACCAAGAAGCTAGCAGGAACTCTTGCTGGAGTTATTACATTCATCATATGCATAACAATCCTTGGATTGGTGACATCCACATGTATACAGAGGAAGAAGAATAAGAAGCCAAGGGACTTTGCGACAAGAATTATACATGACTGGAAGGACAAGAGAAGGGACGAGGACATTGATTTGGCAACAATATTTAATTTTTCAACCATTTCTAAAGCCACAGATAATTTTTCAGAAAATAACAAATTAGGACAAGGTGGCTTTGGACCAGTATACAAGGGCTTGTTGGCAGATGGTCAAGAAATTGCTGTCAAGAGACTTTCTAATACTTCTGGGCAAGGAACAAAGGAGTTCAAAAATGAAGTCATGTTGATGGCAAGACTTCAGCATCGCAATCTTGTAAAACTTTTGGGTTGTTCTATTCATCAAGATGAAAAGTTGCTAATCTATGAATTCATGCACAATGGAAGCTTGGACTACTTCATTTTTGATTCAACACGAAGTAAACTAGTAGATTGGAACAAGCGCTTCCAAATCATTGATGGGATTGCTCGAGGGCTTTTATATCTTCACCAAGACTCAAGACTGAGAATAATCCACAGAGATCTCAAAACTAGTAACATTCTTCTTGATAACGAAATGAACCCAAAAATATCAGATTTTGGTTTGGCTAGAACTATTATAGGAGATCAAGTTGAGGACAAAACAAAGAGAGTGATGGGAACATATGGTTATATGCCTCCCGAGTATGCAGTGCATGGATCTTTTTCAATCAAATCTGATGTCTTTAGTTTCGGTGTAATTGTACTTGAGATAATTAGCGGGAGAAAGATTCAAGGATTTTGTGACCCTCACCACCATCTCAATCTTCCAAGTCATGCATGGAGGCTGTGGGTTGAAGAAAGACCATTAGAGCTGATTGAGGAATTATTAGATGATTTAGTCACTCCTTGTGAAATACTGCGATATATTCACGTGGGCCTATTATGTGTACAACAAAGACCAGAAAATAGGCCCAACATGTTAAATGTAGTTTTAATGTTGAACGGTGAAAAAGCACTTCCCAAGCCAAGCCAGCCCGCGTTTTACACGGGAAACGATATTCCAATTTGGCCGAAGTCTAGTTCAAAAAACTCGGTAAGTTATTCAACAAATGATATTTCCATCTCAATAATAGAGGCTAGATAG 2262 0.3868 MPMLSKESNIILTQNQSIQDGETLVSAGGTFEAGFFNFKNSKYQYFGIWYKNISPRTILWVANRDTPVENSTAILNLTSQGNFFIFDGSKGIIWSSITSRTGEKPFMQLLDSGNLVVKDGDKGENLLWESFDYPGDTFLAGMKIKSNLETGPYRSLTSWRSTEDPAGGEFSFHIDICGFPQLVVTKGANVIIRAGPWIGQYFSGASLLRVQKFLKYSLLFTDNEISYGYETMNSSVITRAVLNPSGITQRLIWSDETRSWEIVSTHPGDQCEYYAFCGANSNCDVANNPICECLEGFSPKFQAKWSSLDWADGCVPMKDLSCVNEDGFLKYSGMKLPDTSSSWFGKIIFENHKRDKRNFNTKKLAGTLAGVITFIICITILGLVTSTCIQRKKNKKPRDFATRIIHDWKDKRRDEDIDLATIFNFSTISKATDNFSENNKLGQGGFGPVYKGLLADGQEIAVKRLSNTSGQGTKEFKNEVMLMARLQHRNLVKLLGCSIHQDEKLLIYEFMHNGSLDYFIFDSTRSKLVDWNKRFQIIDGIARGLLYLHQDSRLRIIHRDLKTSNILLDNEMNPKISDFGLARTIIGDQVEDKTKRVMGTYGYMPPEYAVHGSFSIKSDVFSFGVIVLEIISGRKIQGFCDPHHHLNLPSHAWRLWVEERPLELIEELLDDLVTPCEILRYIHVGLLCVQQRPENRPNMLNVVLMLNGEKALPKPSQPAFYTGNDIPIWPKSSSKNSVSYSTNDISISIIEAR* 754
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0328 753 SMART serkin_6 435 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0328 753 ProSiteProfiles Bulb-type lectin domain profile. 9 130 IPR001480 -
Apr5g0328 753 SMART blect_4 15 134 IPR001480 -
Apr5g0328 753 Gene3D Transferase(Phosphotransferase) domain 1 511 716 - -
Apr5g0328 753 CDD B_lectin 15 134 IPR001480 -
Apr5g0328 753 Pfam S-locus glycoprotein domain 193 301 IPR000858 GO:0048544
Apr5g0328 753 SUPERFAMILY Protein kinase-like (PK-like) 419 706 IPR011009 -
Apr5g0328 753 SUPERFAMILY alpha-D-mannose-specific plant lectins 58 165 IPR036426 -
Apr5g0328 753 Gene3D Phosphorylase Kinase; domain 1 402 510 - -
Apr5g0328 753 CDD STKc_IRAK 441 708 - -
Apr5g0328 753 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 354 740 - -
Apr5g0328 753 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 9 344 - -
Apr5g0328 753 ProSitePatterns Serine/Threonine protein kinases active-site signature. 556 568 IPR008271 GO:0004672|GO:0006468
Apr5g0328 753 ProSiteProfiles Protein kinase domain profile. 435 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0328 753 Pfam Protein tyrosine and serine/threonine kinase 438 702 IPR001245 GO:0004672|GO:0006468
Apr5g0328 753 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 354 740 - -
Apr5g0328 753 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 9 344 - -
Apr5g0328 753 Pfam D-mannose binding lectin 57 160 IPR001480 -
Apr5g0328 753 PIRSF SRK 346 753 IPR024171 GO:0004674
Apr5g0328 753 PIRSF SRK 2 352 IPR024171 GO:0004674
Apr5g0328 753 Gene3D - 5 131 IPR036426 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Apr5g0328 Apr-Chr5 3011815 3015101 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0328 423 753 Receptor kinase-like Gene Family AT4G11480 52.941 1.33e-118 369
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr5g0328 PK_Tyr_Ser-Thr 3.4e-47 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0328 - - lja:Lj3g3v3375760.2 1054.28