Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr5g0324 | ATGGCTTCCTCGAGTGGAACATCTTCAGGGTCATATATGCTTCAGAACTCAGGTTCAGAAGAGGACTTGCAGTTGCTTATGGATCAAAGGAAGAGGAAGAGGATGATATCCAATCGTGAATCTGCAAGGCGATCTAGAATGAGAAAGCAGAAGCACTTGGATGATCTGGTTTCTCAAGTGGCTCAGCTGAGGAAGGAGAATCAGCAAATTCTCACAAGCGTTAACATCACCACCCAACAGTACATGAGTGTCGAGGCTGAAAACTCAGTGCTGAGGGCTCAGGTTGGAGAGCTGAGTCACAGGTTAGAGTCTTTGAATGAGATCATCGAGGTGCTGAATGCCAGCACTGGGGTTTATGGAGCATCAAACAGCTTTTTTGATCAAACCAATAGCCTCTTCAACCCTTTCAATATGGCTTATCTGAACCAGCCTATTGTGGCTTCTGCAGACATGTTTCAGTACTAA | 465 | 0.4538 | MASSSGTSSGSYMLQNSGSEEDLQLLMDQRKRKRMISNRESARRSRMRKQKHLDDLVSQVAQLRKENQQILTSVNITTQQYMSVEAENSVLRAQVGELSHRLESLNEIIEVLNASTGVYGASNSFFDQTNSLFNPFNMAYLNQPIVASADMFQY* | 155 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr5g0324 | 154 | CDD | bZIP_plant_GBF1 | 31 | 82 | IPR045314 | GO:0003700|GO:0006355 | |
Apr5g0324 | 154 | Pfam | bZIP transcription factor | 30 | 82 | IPR004827 | GO:0003700|GO:0006355 | |
Apr5g0324 | 154 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 33 | 48 | IPR004827 | GO:0003700|GO:0006355 | |
Apr5g0324 | 154 | Coils | Coil | 46 | 73 | - | - | |
Apr5g0324 | 154 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Apr5g0324 | 154 | SMART | brlzneu | 26 | 90 | IPR004827 | GO:0003700|GO:0006355 | |
Apr5g0324 | 154 | PANTHER | BZIP TRANSCRIPTION FACTOR | 1 | 152 | - | - | |
Apr5g0324 | 154 | Gene3D | - | 28 | 83 | - | - | |
Apr5g0324 | 154 | PANTHER | BZIP TRANSCRIPTION FACTOR 44 | 1 | 152 | - | - | |
Apr5g0324 | 154 | SUPERFAMILY | Leucine zipper domain | 30 | 82 | IPR046347 | GO:0003700|GO:0006355 | |
Apr5g0324 | 154 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Apr5g0324 | 154 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 28 | 91 | IPR004827 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr5g0324 | Apr-Chr5 | 2946079 | 2948585 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr5g0324 | 26 | 154 | bZIP Transcription Factor Family | AT4G34590 | 56.934 | 1.97e-47 | 149 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Apr5g0324 | bZIP_1 | 1.7e-10 | CL0018 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr5g0324 | K25786 | - | gmx:100101862 | 238.424 |