Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0324 ATGGCTTCCTCGAGTGGAACATCTTCAGGGTCATATATGCTTCAGAACTCAGGTTCAGAAGAGGACTTGCAGTTGCTTATGGATCAAAGGAAGAGGAAGAGGATGATATCCAATCGTGAATCTGCAAGGCGATCTAGAATGAGAAAGCAGAAGCACTTGGATGATCTGGTTTCTCAAGTGGCTCAGCTGAGGAAGGAGAATCAGCAAATTCTCACAAGCGTTAACATCACCACCCAACAGTACATGAGTGTCGAGGCTGAAAACTCAGTGCTGAGGGCTCAGGTTGGAGAGCTGAGTCACAGGTTAGAGTCTTTGAATGAGATCATCGAGGTGCTGAATGCCAGCACTGGGGTTTATGGAGCATCAAACAGCTTTTTTGATCAAACCAATAGCCTCTTCAACCCTTTCAATATGGCTTATCTGAACCAGCCTATTGTGGCTTCTGCAGACATGTTTCAGTACTAA 465 0.4538 MASSSGTSSGSYMLQNSGSEEDLQLLMDQRKRKRMISNRESARRSRMRKQKHLDDLVSQVAQLRKENQQILTSVNITTQQYMSVEAENSVLRAQVGELSHRLESLNEIIEVLNASTGVYGASNSFFDQTNSLFNPFNMAYLNQPIVASADMFQY* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0324 154 CDD bZIP_plant_GBF1 31 82 IPR045314 GO:0003700|GO:0006355
Apr5g0324 154 Pfam bZIP transcription factor 30 82 IPR004827 GO:0003700|GO:0006355
Apr5g0324 154 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Apr5g0324 154 Coils Coil 46 73 - -
Apr5g0324 154 MobiDBLite consensus disorder prediction 1 26 - -
Apr5g0324 154 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Apr5g0324 154 PANTHER BZIP TRANSCRIPTION FACTOR 1 152 - -
Apr5g0324 154 Gene3D - 28 83 - -
Apr5g0324 154 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 152 - -
Apr5g0324 154 SUPERFAMILY Leucine zipper domain 30 82 IPR046347 GO:0003700|GO:0006355
Apr5g0324 154 MobiDBLite consensus disorder prediction 1 23 - -
Apr5g0324 154 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0324 Apr-Chr5 2946079 2948585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0324 26 154 bZIP Transcription Factor Family AT4G34590 56.934 1.97e-47 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr5g0324 bZIP_1 1.7e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0324 K25786 - gmx:100101862 238.424