Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0318 ATGGCTCCAAAGAAGGATAAGGCTCCTCCACCTTCCTCCAAGCCAGCCAAATCTGGCGGTGGCAAACAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAATAACATGGTGCTGTTTGATCAGGGCACTTATGACAAGCTCCTTTCTGAAGCACCCAAATACAAGCTCATCACTCCTTCCATTCTCTCTGATCGTTTGAGGATTAATGGATCACTTGCAAGGAGGGCAATAAGAGAATTGATGGCTAGAGGTTCAATCAGGATGGTGTCTGCCCATGCAAGCCAGCAGATTTACACCAGGGCTACAAACACCTAG 327 0.474 MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIRELMARGSIRMVSAHASQQIYTRATNT* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0318 108 PANTHER 40S RIBOSOMAL PROTEIN S25 2 108 IPR004977 -
Apr5g0318 108 PANTHER BNAA04G12260D PROTEIN 2 108 - -
Apr5g0318 108 MobiDBLite consensus disorder prediction 1 36 - -
Apr5g0318 108 Gene3D - 21 108 - -
Apr5g0318 108 Pfam S25 ribosomal protein 7 105 IPR004977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0318 Apr-Chr5 2880967 2884747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0318 1 107 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 93.458 3.66e-56 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0318 K02975 - gmx:100499810 160.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0318 5 2880967 2884747 Apr5g0318 5 2880967 2884747 ECH