Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0305 ATGGCTTCAAGCTCTCTCAGCAAACAACAATCTTACGACTCCTCCTGGACACCAAAACAGAATAAGCTGTTTGAAAAAGCACTAGCAAAATTTGATAAGGACACCCCTGATCGCTGGCAGAATGTAGCCAAAGCAGTTGGTGAAAAATCAGAAGAAGAAGTTAAGAGACACTATGAGATCCTCTTGGAGGATCTCAGACACATAGAAGCTGGTCGTGTTCCTATTCCCAACTACAAGTCCACAGGAAGCAGTACCAATGCAATAAACAATTGA 273 0.4249 MASSSLSKQQSYDSSWTPKQNKLFEKALAKFDKDTPDRWQNVAKAVGEKSEEEVKRHYEILLEDLRHIEAGRVPIPNYKSTGSSTNAINN* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0305 90 ProSiteProfiles Myb-like domain profile. 8 62 IPR001005 -
Apr5g0305 90 CDD SANT 15 62 IPR001005 -
Apr5g0305 90 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 81 IPR044636 GO:0003700
Apr5g0305 90 ProSiteProfiles SANT domain profile. 11 66 IPR017884 -
Apr5g0305 90 Gene3D - 7 75 - -
Apr5g0305 90 PANTHER PROTEIN RADIALIS-LIKE 3 1 81 - -
Apr5g0305 90 SUPERFAMILY Homeodomain-like 14 69 IPR009057 -
Apr5g0305 90 SMART sant 12 64 IPR001005 -
Apr5g0305 90 Pfam Myb-like DNA-binding domain 14 58 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0305 Apr-Chr5 2763497 2773450 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Apr5g0305 Myb_DNA-binding 1.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0305 - - gmx:100798314 152.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0305 5 2763497 2773450 Apr5g0305 5 2763497 2773450 ECH