Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0302 ATGCTCTTTTCATGTCAAAAATACAACCTTCACCTTCCCTGCTCTTCTGTCATCCTCCAAAACCCAACAACATCCACCGTTGTCAAGTGTCAGAACCCAAATGTCCCAAACGAACAACAACACGCCATTCTCCGCAAACACAATTCCAAATCCACATCCTTTCTCCTTCACCATATTTCCCATAAAGATGGGGTTGAAAATCCCAAACCCAGTGAGCTTCAAGACCCAATGCCCCATGAAGAAAAAGTTAAGGTTTTGGAACTTTCCCTTGTCAGGAAAAGGACCCCTCAGTTCCCTGGCTCCATCTATGCTCAGTCCCCAAGTGACACCGATGTGGGTTCTTCTCTGCCCCCTCTTCGCACTCTGTTTCAATCAAGTGCTAACAATCACGATAAAGAGGATGAAGAGATGTTAATGCGCGCTCTTGAGATTCGTAGGAAGGTCACTGAGGAGGTTTTCAAGGAAGCCCTGCGAAAGGGAAAGTTTGGAATCACCTACACTACCAATGTGGTTAACAGGATACCTGCTTTTATTGATCACATCATGATTGAAGCTGCTAACCTGAAAAGATTGCCTCAATATTCCAGCTCCACCTTTAATTTACGTGCCAAAACGGTTATTGATGATTCTCAAGTTGTGCCACTTATCAGATGGTTGAAACATCATGCAATATCATATCCTCGGATAGCAAAGCTCATTGTGATGTCAAGAGGAAAACTCGAGTCCATAAGGAGTTTTGTTGAGTGGTTGAAGTCGGTTCATGTGAAAGGCGAGTTTCTCGGGGTTGTAATGTTGAATGCTGGAGATAATATTTTGCAGTGCAGTCATGAAGAGCTGGATGAAATTGTTCGGTATTTAGAGTCCAATGGAGTCAGGAGGGATTGGATGGGTTATGTTATAAGTCGATGTCCTCAATTATTGTCTTACACCTTAGAAGAAGTGAAGATTCGTGTGCAGTTCTACCTAGATATGGGTTTAAATGAGAAGGATTTTGGCACTATGGTTTTTGATTTTCCGAAAGTACTTGGTTACTATTCTTTGGAGGAAATGAACCTAAAGGTTAATTACTTAAAAGAATTTGGGCTTCAACGTAAGGATGTTGGCAAATTGCTCGCATTTAGGCCACAATTGATGGCGTGCAGCATTGATGAACAATGGAAACCTCTTGTTAAGTATCTGTACTATTATGGGATTACTCGAGATGGTATGAGGAGAATGCTTACCATTAAACCAATGGTCTTTTGTATTGACTTGCAGATGACTATTGTGCCAAAGGTAAAGTTTTTACAGGACATTGGGGTTCGAAATGATGCAATTGGCAACATGCTTGTGAAGTTTCCTACTCTACTTACTTACAGCCTGCACAAGAAGATTAGACCTGTGGTTATATTCTTAATGACCAAAGCTGGAGTCAGTGAGAAAGACATTGGCAAGGTCATAGCTCTTGGACCTGAGCTCTTGGGGTGCCACATAGTACATAAGCTTGAAGTAAATGTAAAATATTTTTTGTCTCTTGGCATACGTCTTAAGCAATTGGGGGAGATGATTGCTGATTTTCCGATGCTTCTCAGATATAATATAGATGTTCTTCGTCCCAAATATAGTTATTTGCGAAAAACCATGGTCCGGCCTTTGGAAGATATCATTGAGTTTCCAAGCTATTCTCTTGATGGTCGAATTATCCCAAGACACAAGGTTCTAGTGGAGAACCAGATTAATGTTAAGCTGAGATACATGTTGGCTAGCTCTAATGAAGAATTCAACAAAATGGTCAAGTCCATAATTAAAAAGCGCCAAAGATTTGAATCTGCTGTCATGAATGAGGATACTACTCAGCATCATTCTGTTGTTACTAGGGATATTACTACGCGAGACGCAAACAACAGCAACTAA 1893 0.4094 MLFSCQKYNLHLPCSSVILQNPTTSTVVKCQNPNVPNEQQHAILRKHNSKSTSFLLHHISHKDGVENPKPSELQDPMPHEEKVKVLELSLVRKRTPQFPGSIYAQSPSDTDVGSSLPPLRTLFQSSANNHDKEDEEMLMRALEIRRKVTEEVFKEALRKGKFGITYTTNVVNRIPAFIDHIMIEAANLKRLPQYSSSTFNLRAKTVIDDSQVVPLIRWLKHHAISYPRIAKLIVMSRGKLESIRSFVEWLKSVHVKGEFLGVVMLNAGDNILQCSHEELDEIVRYLESNGVRRDWMGYVISRCPQLLSYTLEEVKIRVQFYLDMGLNEKDFGTMVFDFPKVLGYYSLEEMNLKVNYLKEFGLQRKDVGKLLAFRPQLMACSIDEQWKPLVKYLYYYGITRDGMRRMLTIKPMVFCIDLQMTIVPKVKFLQDIGVRNDAIGNMLVKFPTLLTYSLHKKIRPVVIFLMTKAGVSEKDIGKVIALGPELLGCHIVHKLEVNVKYFLSLGIRLKQLGEMIADFPMLLRYNIDVLRPKYSYLRKTMVRPLEDIIEFPSYSLDGRIIPRHKVLVENQINVKLRYMLASSNEEFNKMVKSIIKKRQRFESAVMNEDTTQHHSVVTRDITTRDANNSN* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0302 630 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF2, CHLOROPLASTIC 63 612 - -
Apr5g0302 630 PANTHER CGI-12 PROTEIN-RELATED 63 612 IPR003690 GO:0003690|GO:0006355
Apr5g0302 630 Pfam mTERF 349 587 IPR003690 GO:0003690|GO:0006355
Apr5g0302 630 Pfam mTERF 224 358 IPR003690 GO:0003690|GO:0006355
Apr5g0302 630 Gene3D Transcription termination factor 3, mitochondrial 374 601 IPR038538 -
Apr5g0302 630 SMART mt_12 368 399 IPR003690 GO:0003690|GO:0006355
Apr5g0302 630 SMART mt_12 332 363 IPR003690 GO:0003690|GO:0006355
Apr5g0302 630 SMART mt_12 545 573 IPR003690 GO:0003690|GO:0006355
Apr5g0302 630 SMART mt_12 440 472 IPR003690 GO:0003690|GO:0006355
Apr5g0302 630 SMART mt_12 297 327 IPR003690 GO:0003690|GO:0006355
Apr5g0302 630 SMART mt_12 262 292 IPR003690 GO:0003690|GO:0006355
Apr5g0302 630 SMART mt_12 513 543 IPR003690 GO:0003690|GO:0006355
Apr5g0302 630 SMART mt_12 477 508 IPR003690 GO:0003690|GO:0006355
Apr5g0302 630 SMART mt_12 404 435 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Apr5g0302 mTERF 1.2e-61 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0302 K15032 - zju:107426883 857.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0302 5 2677425 2681180 Apr5g0302 5 2677425 2681180 ECH