Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0242 ATGACATCCTTGGATATGCCCAGCATGGCTTTGTCTCTCTCCTCTCTGCTTCTCCCACTTGGTTCTACTTGTTGTAAAAGTCCATCTTTTACTCCTCCTGAAAGCATTTTGGTTGACAAATTTCGAAGTTTAGTTGTTAAAGTGAAGTCCTCGGAGACAAGGGAATCCATTGCTATGTTTAATTCCAATTCACGTAGGGACTTTCTTGGGTTAGCTTTAGGGGTCTCAGGACTCTTCATCCATTCATTGGATGCCAATGGAGCTGGTTTGCCACCGGAGGAAAAGCCAAAACTATGTGATGACACTTGTGAGAAAGAGCTTGAAAATGTGCCTATGGTAACAACAGAATCAGGATTGCAATACAAGGATATTGAAGTTGGGCGAGGCCCTAGTCCACCAGTTGGATTTCAGGTGGCAGCTAATTATGTTGCCATGGTTTCATCGGGACAAATATTCGATAGTTCACTGGAGAAAGGTCAGCCTTACATTTTTCGCGTTGGTTCTGGTCAGGTGATAAAGGGACTTGATGAAGGTATTTTGAGCATGAAAGTAGGAGGGAAGCGTCGACTGTACATACCTGGATCACTGGCATTCCCAAAAGGCCTTACATCTGCTCCTGGAAGACCAAGGGTGGCTCCAAACAGTCCAGTCATATTTGATGTTAGTCTGGTATATATACCGGGGCTTGAAGTGGATGAGGAATAA 705 0.4426 MTSLDMPSMALSLSSLLLPLGSTCCKSPSFTPPESILVDKFRSLVVKVKSSETRESIAMFNSNSRRDFLGLALGVSGLFIHSLDANGAGLPPEEKPKLCDDTCEKELENVPMVTTESGLQYKDIEVGRGPSPPVGFQVAANYVAMVSSGQIFDSSLEKGQPYIFRVGSGQVIKGLDEGILSMKVGGKRRLYIPGSLAFPKGLTSAPGRPRVAPNSPVIFDVSLVYIPGLEVDEE* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0242 234 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 43 234 - -
Apr5g0242 234 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-3, CHLOROPLASTIC 43 234 - -
Apr5g0242 234 SUPERFAMILY FKBP-like 99 225 - -
Apr5g0242 234 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 134 224 IPR001179 GO:0003755
Apr5g0242 234 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 135 227 IPR001179 GO:0003755
Apr5g0242 234 Gene3D - 97 226 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0242 Apr-Chr5 2173576 2176670 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0242 112 224 Calmodulin-binding Proteins AT5G48570 38.596 6.23e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0242 K01802 - gmx:100818743 394.045