Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0226 ATGGATAAGGAGATATCCCATTCATCTTCTTCTTCTGAATTGGTGAAATCAGAAGCATCCTCTTCATCGCAATTACCATTCAGCCACGACATCACCCAAATGCTCCCCAAAAACAGAACTCACAGACGCGCCCATTCCGAAATTCTTACGCTTCCCCATCGCATCACCTTCAATACCGACGAAGATTTCCTCCCTCTCTACCTCGACGATCAATCTCCTTCTCTTTCTGTTTCTGTTTCTGCTTCTGCATCCAGCGCCGATTCAAAGAAGGCAATGTCTGCTGCCAACCTTGCAGACCTTGCCTTAGTTGATCCCAAGCGTGCTAAAAGGATATGGGCAAACAGACAGTCTGCTGCAAGATCAAAAGAAAGGAAGACGCGTTACATTTCGGAGCTTGAAAGGAAAGTGCAGACACTGCAAACAGAAGCAACATCCGTGTCTGCACAACTAACTCACTTGCAGAGAGATACAAACGGACTTACTGCTGAGAACAGTGAGTTGAAGTTGCGGTTGCAAACCGTGGAGCAACAGATTCACTTGCAAGATGCATTGAATGATGCATTAAAACAGGAAATTCAGCATTTGAAAGGACTGACTGGACAAGTTATGCCGAATGGAGGACCTCTGAACTTTGCTCCATTTAGTGGGGGGCAACAATTCTATCCCAACAATCAGGCAATGCAAACTCTTTTAGCTGCACAACAGTTGCAACAACTTCAAATTCATTCCCAGAAGCAGCCGCATCAACTTCAGCAGCAACAACAGTTTCATCAGCATCAACTCCGGCAACAGCAACAGGAACAGCAACAGCAGCAGCAGCGGCAACAGCAAAAAGAACAATAA 843 0.4567 MDKEISHSSSSSELVKSEASSSSQLPFSHDITQMLPKNRTHRRAHSEILTLPHRITFNTDEDFLPLYLDDQSPSLSVSVSASASSADSKKAMSAANLADLALVDPKRAKRIWANRQSAARSKERKTRYISELERKVQTLQTEATSVSAQLTHLQRDTNGLTAENSELKLRLQTVEQQIHLQDALNDALKQEIQHLKGLTGQVMPNGGPLNFAPFSGGQQFYPNNQAMQTLLAAQQLQQLQIHSQKQPHQLQQQQQFHQHQLRQQQQEQQQQQQRQQQKEQ* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0226 280 Gene3D - 106 158 - -
Apr5g0226 280 SUPERFAMILY Leucine zipper domain 106 160 IPR046347 GO:0003700|GO:0006355
Apr5g0226 280 SMART brlzneu 102 166 IPR004827 GO:0003700|GO:0006355
Apr5g0226 280 Coils Coil 122 149 - -
Apr5g0226 280 Coils Coil 157 191 - -
Apr5g0226 280 Coils Coil 258 280 - -
Apr5g0226 280 Pfam bZIP transcription factor 106 154 IPR004827 GO:0003700|GO:0006355
Apr5g0226 280 MobiDBLite consensus disorder prediction 242 280 - -
Apr5g0226 280 CDD bZIP_plant_RF2 107 156 IPR044759 GO:0003700|GO:0006355
Apr5g0226 280 MobiDBLite consensus disorder prediction 1 41 - -
Apr5g0226 280 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 104 167 IPR004827 GO:0003700|GO:0006355
Apr5g0226 280 MobiDBLite consensus disorder prediction 10 34 - -
Apr5g0226 280 PANTHER BASIC-LEUCINE ZIPPER DOMAIN-CONTAINING PROTEIN-RELATED 75 276 - -
Apr5g0226 280 PANTHER BASIC-LEUCINE ZIPPER DOMAIN-CONTAINING PROTEIN-RELATED 9 69 - -
Apr5g0226 280 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 9 69 - -
Apr5g0226 280 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 75 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0226 Apr-Chr5 2055157 2057448 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0226 27 69 bZIP Transcription Factor Family AT2G31370 43.750 2.71e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr5g0226 bZIP_1 1.2e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0226 - - aprc:113865727 404.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2387 2 28556420 28560518 Apr5g0226 5 2055157 2057448 PCT