Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0225 ATGGAGGATAGCAATAATTGTGACACATGTTGGGAAATCAACAGTGCGGATAATGGCGCTGAGTCCATGGAAGAAGTAGATGAATGTGATGTAATTATGTATGATAACTTGAATCAGGGTTGTGAACCTTGCGGCCCAGCATCGGGGATGTCATTTCCTTCCAAGGATGCTGTTAAATCATTTTATAGGCAGTATGCTTGTAGAATGGGATTTGGTTTCATGATAAGAAACTCGAGAAAACGACGTGATGGAAAGTTACATTACTTTATACTAGCATGTTCACGAGAGGGAAATCGTGTGCCAAACACTTTGAAGTCATTGCCCACAATCAAGAATAATTGTGAAGCTAGAATTACAGTCTCTTTGAAAGAAGATGGATTGTGGTACATAATGAAAGCAGTACTTGACCACTCTCATGAGCTTAGCCCTACAAAAGCAATAAGGTTCAAAGTAAACAAAAACACTAACATGCAATTGAAGAGAACAATAGAAACCAATCATGAAGCAAGGGTGGAGATGAACAAGACCATCCAATCTCTTGTTTGTGATGTGGGGGGCTATGAAAATTTATCATTTGCTGAACGAGATGTTAGAAATTATGTTCAGAAGAAAAGATATATAAATGGAAAACAAGGTGATGGTAGGGCTCTAACTAGTTATTTTTTAAGGATGCAGGAGCAAAATCGAAGTTTCTTCTACGATATAGACTTGGATGATTTTTTTTGTGTGAAAAATGTATTTTGGGCAGATGCAAGAAGTAGAGCAACATATGATTCATTTGGAGATGTGGTTACTTTTGACACAACATGCCTAACAAATAAGTATGAAATGCCATTTGTTTCATTTGTTGGTGTTAATCATCATGGGCAACATGTTTTATTGGGATGTGGTCTACTTTCTACTGAAGAGACAGAGTCTTTTGTGTGGCTATTTAAATCTTGGTTTCGTTGCATGTCAGGAAATCCTCCTCAAGGTATAGTGACTGACCAATGCAAAGCAATACAAAATGCTATTAAGCTAGTCTTTCCAAACACCAAACATAGGTGGTGCTTATGGCATATAATGAAAAAAATCCCTGAGAAGTTGAAAACAAATGCTGAATATAATAAGAACATAAAGAATGCCATGAAAGGTGTAGTTTATGATACCTGCACAGAAGCTGAATTTGAAGATCGATGGGGTTATTTTGTCAAAGGATTTAACTTACAAGACAATGAATGGCTGAATGAGTTGTACAATGAGCGAAGGAGATGGGTTCCAATTTTCTTAAGAAAGGATTTTTGGGCAGGAATGTCTATCAGTCAACGGGGTGAGAACATACATCTCTTTTTCGATGGATATATCAACCGAACAACTTCTTTGCAACAGTTTGTTCAACTGTATGATGATGCCCTCCATAACAAAGTAGAAAAAGAGTTTGAAGCAGATTTGCGATCATTCAACACAATGGTTCGTTGTGGATCAAATTCAATGATTGAAAAACAATTCCAATCTTCTTATACCCATGCAAAATTTAACGAGGTGCAAGCTGAATTTAGAGCAAAAATCAATTGCTCTGTATCCCTTAAGTGTGTGGAAGGTAACGTTTGTACTTATGATGTGTTGGAGGACATAATAGTTGAAGGACAACCAAAGGAAGCTAATTTTGAGGTCATATTTCATCGAGACAATCATGATGTTAGCTGCAAGTGTTCACTGTTTGAGTTTAGAGGCATTGTGTGTAGACATTCACTTATTGTATATGCACAAGAAAGGGTGAAACAAGTACCAGCAAAGTATATTTTGCCAAGATGGAGCAAAAATATAAAATGGAAACATTCATATACCAGGAGTAGTTACGATGTGATACAATTGAAGACACAAATGCAAAGGTATGACAATTTGTGCCAGGACTTTTATGAGATTGCAGAAGTTGCTGCAGAGTTTGAGCATGTTACCTATTTCCTTCAAAATAACCTGTGTGATTTGAAACGGATGGTACAATCCATGGCTGCATCCACTCACCGACCTGCATTCTTACCTAAATAG 2028 0.3708 MEDSNNCDTCWEINSADNGAESMEEVDECDVIMYDNLNQGCEPCGPASGMSFPSKDAVKSFYRQYACRMGFGFMIRNSRKRRDGKLHYFILACSREGNRVPNTLKSLPTIKNNCEARITVSLKEDGLWYIMKAVLDHSHELSPTKAIRFKVNKNTNMQLKRTIETNHEARVEMNKTIQSLVCDVGGYENLSFAERDVRNYVQKKRYINGKQGDGRALTSYFLRMQEQNRSFFYDIDLDDFFCVKNVFWADARSRATYDSFGDVVTFDTTCLTNKYEMPFVSFVGVNHHGQHVLLGCGLLSTEETESFVWLFKSWFRCMSGNPPQGIVTDQCKAIQNAIKLVFPNTKHRWCLWHIMKKIPEKLKTNAEYNKNIKNAMKGVVYDTCTEAEFEDRWGYFVKGFNLQDNEWLNELYNERRRWVPIFLRKDFWAGMSISQRGENIHLFFDGYINRTTSLQQFVQLYDDALHNKVEKEFEADLRSFNTMVRCGSNSMIEKQFQSSYTHAKFNEVQAEFRAKINCSVSLKCVEGNVCTYDVLEDIIVEGQPKEANFEVIFHRDNHDVSCKCSLFEFRGIVCRHSLIVYAQERVKQVPAKYILPRWSKNIKWKHSYTRSSYDVIQLKTQMQRYDNLCQDFYEIAEVAAEFEHVTYFLQNNLCDLKRMVQSMAASTHRPAFLPK* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0225 675 PANTHER OS03G0843700 PROTEIN 10 670 - -
Apr5g0225 675 Pfam MULE transposase domain 263 357 IPR018289 -
Apr5g0225 675 Pfam FAR1 DNA-binding domain 60 142 IPR004330 -
Apr5g0225 675 ProSiteProfiles Zinc finger SWIM-type profile. 549 585 IPR007527 GO:0008270
Apr5g0225 675 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 10 670 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0225 Apr-Chr5 2050283 2053586 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Apr5g0225 MULE 4e-34 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0225 - - gmx:102667848 1144.41