Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0220 ATGGATATGGGGATTGATGACTCTATTAACAGCAAGACTGAAGTAGATGAGGTTAGTAGCGTAGCTATTGAAACCAGAGTAGGTGGAAATTCTGTTGAACCAGCTCACAAGCAAGATCAAGATGATAATGTGACTCAAGATTCTTCTGAAGGGGTTACAATCCCATCTGCAATTCCCACAGTAACAGTTGTTTCAGCTGACGAGCCCTATGTGGGTCAGGAGTTCGAGTCGGAAGCAGCAGCACATGCATTTTATAATGCATATGCCACAAATGTTGGATTCATCATACGTGTGAGTAAACTCTCAAGATCAAGGCGTGATGGATCTGCTATTGGACGAGCTCTTGTTTGCAACAAAGAAGGTTTCAAAATGCCTGACAAACGTGAAAAGATTGTAAGGCAAAGGGCTGAGACCAGGGTTGGTTGCAGAGCAATGATTTTGGTGAGAAAAGTTAGTTCTGGTAAATGGGCTGTTACCAAGTTTGTAAAGGAACACACACATCCTTTGACTCCTGGTAAAGGGAGAGAAGGGATTGCGAACAATATCCGAGTGAACGTGATAAAATTCAGGAACTATCTCAGCAGTTGGCAATTGAGAAAAAACGTTCAGCTACCTATAAAAGACACCTTGAATTGA 636 0.4214 MDMGIDDSINSKTEVDEVSSVAIETRVGGNSVEPAHKQDQDDNVTQDSSEGVTIPSAIPTVTVVSADEPYVGQEFESEAAAHAFYNAYATNVGFIIRVSKLSRSRRDGSAIGRALVCNKEGFKMPDKREKIVRQRAETRVGCRAMILVRKVSSGKWAVTKFVKEHTHPLTPGKGREGIANNIRVNVIKFRNYLSSWQLRKNVQLPIKDTLN* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0220 211 Pfam FAR1 DNA-binding domain 84 170 IPR004330 -
Apr5g0220 211 MobiDBLite consensus disorder prediction 1 51 - -
Apr5g0220 211 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 2 182 - -
Apr5g0220 211 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0220 Apr-Chr5 2018914 2021374 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Apr5g0220 FAR1 7.5e-31 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0220 - - aprc:113865977 409.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2379 2 28516605 28520900 Apr5g0220 5 2018914 2021374 PCT