Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0217 ATGCACCTATGGTCAACCATGCTTCTATATGCGGTTTTATCATACTTGTGGTTGCCAGTTACAAGTCTTGGTTCCATGTCATCTATAGCCATCTCATATGGAGAAAAAGGTTCTGTCTTTTGTGGTTTGAAATCTGATGGGTCTCATACTGTGACTTGCTATGGATCCAACTCTGCCATAATCTATGGAACACCAACCCATTTCTCATTTATTGGTCTAACTGCTGGAGATGGCTTTGTTTGTGGGCTTCTAATGGGTTCTAATCAACCATATTGCTGGGGTAGCAGTGCCTATATTGAAATGGGTGTTCCTCAACCAATGATCAAAGGAGCTGAGTATCTAGAAATTAGTGCTGGTGATTACCATGTTTGTGGCTTGAGGAAACCTTTGACTGGAAGACACAGGAACATTTCTTTGGTTGATTGCTGGGGCTACAACATGACCAAGAACTATGTCATTGGTGGACAGATTCAATCAATAACCGCAGGTTCTGAGTTCAATTGTGGGTTGTTTTCTCAGAATAGAACTGTGTTTTGTTGGGGTGATGAGACTAGTAGTCTAGTGATTAGTTTGATTCCACTGGACAGAAGATTCCAGAAAATTTCAGCTGGTGGGTATCACGTGTGTGGAATCTCAGAAGGGGTGAATTCAAAAACTGTTTGTTGGGGGAGAAGCTTGGATATTGAGGAAGAAATTTCAGTGACACATGCAGGTCAAGGCAATGTTGATTTGGCTCCAAATGACCCCATGCTTTCTGTAGTGGGAGGTAAGTTTCATGCTTGTGGCATTAAGAGCTATGATCATGGAGTGATTTGTTGGGGCTTTATCATCAAACCAAGCACTCCACCTCCTAGTGAGATTAAAGTCTTTGAGGTTGCAGCTGGTGATTATTTCACTTGTGCAGTTCTTGCTGAGAAATCTCTTATGCCTGCTTGTTGGGGTGTTGACTTTCCTACCTCTCTTCCTTTAGCTGTTTCACCAGGAATGTGCCAAACTTCTCCATGTCCTCCTGGTTTCTATGCAATGGATGAGCATAAGGGTCTTTGCAAGTCCCCAGATTCTCGTGTTTGCATGCGCTGCAGTGGTACATGTCCTGCTGAAATGTTTCAGAAAAGTGGGTGCAATTTGGCATCTGATAGACTGTGTGATTATAACTGTTCTGCTTGTTCTTCTTCTGAGTGCTTCCTGAACTGCTCCTCTTCATATTCCAATGCTGCCACAGAGAAGAAAAATGAAAAGTTTTGGGCCTTGCAGTTGCCAGTAGTTATTGCTGAGATTGCTTTTGCAGTTTTCATAGTTAGTATTGTGTCAATAACTGCAGTTTTGTATGTTCGGTACAGGCTAAGAGATTGTGACTGTTCAAAAAGGACAAAGGTGAAGAGACTTGGTGGCAGTTCTTCCCTCCAAAATGAGAACAGCAAGGTCAGGCCAGACTTGGAGGATTTCAAGATTAGGAGGGCTCAAATGTTCACCTATGAGGAACTTGAAAGTGCAACTGGTGGATTCAAAGAAGAATCCATAGTGGGAAAGGGAAGCTTTTCATGTGTGTTCAAGGGTGTTTTGAAAGATGGGACAGTTGTTGCAGTTAAAAGGGCAATAGTGTCACCCAACATGCAGAAAAATTCCAAAGAGTTTCACACAGAACTTGACTTACTCTCAAGATTGAACCATGCCCATTTACTCAACCTTCTAGGCTATTGTGAAGAAGGAGGAGAAAGACTTCTTGTGTATGAGTTCATGGCTCATGGGTCTTTGCATCAACACCTACATGGCACAAACCAAGTGTTGAGAGAGCAGTTAGATTGGATAAGGAGGGTAACAATTGCAGTGCAAGCAGCACGTGGAATTGAATATTTGCATGGCTACGCTTGCCCACCTGTGATCCATAGAGACATAAAGTCGTCAAACATCCTCATTGATGAAGAACACAATGCAAGAGTGGCTGATTTTGGTTTGTCATTGTTGGGTCCTGCAGATAGTAGTTCCCCACTAGCTGAACTCCCAGCTGGAACTCTTGGATATCTTGATCCTGAGTACTATAGGCTTCATTACCTCACCACAAAATCTGATGTCTACAGCTTTGGTGTTCTACTTTTGGAAATTCTAAGTGGTAGAAAAGCCATTGACATGCAATATGAAGAAGGAAACATAGTTGAATGGGCAGTGCCACTGATCAAGTCAGGAGATATAACGGCAATATTGGACCCGGTTCTAAAACCTCCACCTGATCTTGAAGCCTTGAAAAGAATAGCCAATGTGGCATGCAAATGTGTGAGAATGAGAGGGAAAGAGAGACCCTCAATGGATAAAGTAACAACAGCTTTGGAAAGAGCTCTTGCAATGTTAATGGGTAGTCCATGCATTGAGCAACCGATTTTGCCCACTGAGGTTGTTTTGGGAAGTAACAGGTTGCACAAGAAATCATCTCAAAGGTCTTCAAACAGGTCAGCTTCTGAAACTGATGTGGCAGAAACTGAGGACCAAAGGTTTGAGTTTCGAGCACCCTCTTGGATAACTTTCCCTAGTGTTACATCTTCTCAAAGAAGAAAGTCTTCAGTCTCAGAAGCAGATGTTGATGGGAAGAATGTAGAAGTGAAAAACATGAGCAATGTTGGAGGTGGAGGTGGAGGTGATGTTCTAAGAAGCCTTGAGGAAGAGATTGGTCCTGCTTCTCCTAGAGAGAGGTTGTTCTTGCAGCACAATTTCTAA 2709 0.4271 MHLWSTMLLYAVLSYLWLPVTSLGSMSSIAISYGEKGSVFCGLKSDGSHTVTCYGSNSAIIYGTPTHFSFIGLTAGDGFVCGLLMGSNQPYCWGSSAYIEMGVPQPMIKGAEYLEISAGDYHVCGLRKPLTGRHRNISLVDCWGYNMTKNYVIGGQIQSITAGSEFNCGLFSQNRTVFCWGDETSSLVISLIPLDRRFQKISAGGYHVCGISEGVNSKTVCWGRSLDIEEEISVTHAGQGNVDLAPNDPMLSVVGGKFHACGIKSYDHGVICWGFIIKPSTPPPSEIKVFEVAAGDYFTCAVLAEKSLMPACWGVDFPTSLPLAVSPGMCQTSPCPPGFYAMDEHKGLCKSPDSRVCMRCSGTCPAEMFQKSGCNLASDRLCDYNCSACSSSECFLNCSSSYSNAATEKKNEKFWALQLPVVIAEIAFAVFIVSIVSITAVLYVRYRLRDCDCSKRTKVKRLGGSSSLQNENSKVRPDLEDFKIRRAQMFTYEELESATGGFKEESIVGKGSFSCVFKGVLKDGTVVAVKRAIVSPNMQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEFMAHGSLHQHLHGTNQVLREQLDWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPADSSSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVEWAVPLIKSGDITAILDPVLKPPPDLEALKRIANVACKCVRMRGKERPSMDKVTTALERALAMLMGSPCIEQPILPTEVVLGSNRLHKKSSQRSSNRSASETDVAETEDQRFEFRAPSWITFPSVTSSQRRKSSVSEADVDGKNVEVKNMSNVGGGGGGDVLRSLEEEIGPASPRERLFLQHNF* 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0217 902 PANTHER RECEPTOR-LIKE KINASE 3 902 - -
Apr5g0217 902 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 3 902 - -
Apr5g0217 902 Gene3D Transferase(Phosphotransferase) domain 1 580 783 - -
Apr5g0217 902 Gene3D Phosphorylase Kinase; domain 1 472 579 - -
Apr5g0217 902 Gene3D - 65 326 IPR009091 -
Apr5g0217 902 CDD STKc_IRAK 508 777 - -
Apr5g0217 902 SUPERFAMILY Protein kinase-like (PK-like) 483 775 IPR011009 -
Apr5g0217 902 ProSiteProfiles Protein kinase domain profile. 502 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0217 902 ProSitePatterns Protein kinases ATP-binding region signature. 508 530 IPR017441 GO:0005524
Apr5g0217 902 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Apr5g0217 902 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 334 382 IPR001368 GO:0005515
Apr5g0217 902 MobiDBLite consensus disorder prediction 804 827 - -
Apr5g0217 902 Pfam Protein tyrosine and serine/threonine kinase 505 774 IPR001245 GO:0004672|GO:0006468
Apr5g0217 902 SMART serkin_6 502 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0217 902 SUPERFAMILY RCC1/BLIP-II 22 275 IPR009091 -
Apr5g0217 902 MobiDBLite consensus disorder prediction 804 819 - -
Apr5g0217 902 MobiDBLite consensus disorder prediction 843 880 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0217 Apr-Chr5 1993357 1996314 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0217 4 902 Receptor kinase-like Gene Family AT3G59420 67.991 0.0 1249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Apr5g0217 Pkinase 3.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0217 - - gmx:100797455 1665.2