Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0186 ATGGATTCAGCAACAACAGCTCCACCCTCACCGGAGCTCCACTTCGACAACCTCAAAGCCCTCAAAATCCTCGGAAAAGGCGCCATGGGCACCGTCTTCCTCGTCCACCACACCGCCGCCGCCGCCACCACCCCCTTCGCCCTGAAAGTCGTCGACAAAACCTCCCTTCACGCCAAACTCGACGCCGAACGCCGCGCCCGCTGGGAAATCCAAGTTCTCTCCACACTCTCACACCCGTTCCTCCCTTCCCTTTTGGGAACCTTCGATTCCCCAGAGTTACTCGCATGGGCCATCCCTTACTGCCCCGGCGGCGACCTCAATGTCCTCCGTTACCGTCAAAACGACCGTGTTTTCTCTCCCTCCGTTATTCGCTTCTACCTCGCCGAAATCCTATGCGCTCTCGACCACCTTCATGCCATGGGCATCGCTTACCGCGACTTAAAACCCGAAAATGTCCTCATTCAAAATTCTGGCCACGTCACCCTCACCGACTTCGACCTATCTCGCAAACTCGCTCCCAAATCCCTCAAAACCGTCCCTTCCCCAATCCCTTTGCCAGATTCGAAGCTTCCAGAACCTCGCCGGAAGCACCGCCGGAATTTCTCCCGGTGGATCCCCCTCCTCCCGCCCGACGTTCCTAATTTCAATAAGAGCGGATTGAAGAAGGCTAATTCCGCCCGAGTCAGCCCCGTGAGTCGACGAAAACTTAGTTTCTCCGACGGCGAACGGTCCAACTCGTTCGTCGGCACGGAGGAGTATGTTTCGCCGGAGGTTGTTCGCGGCGACGGTCACGAGTTCGCTGTTGACTGGTGGGCCCTGGGGATTCTCACCTACGAAATGCTATACGGTACGACGCCGTTTAAGGGGAAGAACCGCAAGGAAACGTTCCGGAATGTGCTCACGAAACCGCCGGGCTTCGTCGGGAAGAGGTCGGCGTTGACGGACCTGATCGAGAAGTTGTTGGAGAAGGATCCGAAGAAGCGTTTGGGTTATGGGCGTGGCGCTAATGAGATCAAGGAGCACGAATTCTTCAGAGGGGTTCAGTGGGACCTGTTGACTGAGGTGGTGCGGCCGCCGTTCATTCCGGCGAGAGAGGACGGCACCGAGGATATGCCTTCGGCAGGAAATGGCGGCGTGGATATTAGGGATTACTTCCAGAGCTTGGCGCCTCCGCCGTCGTTGCCGCCGTCGCCGTCGCCGCCAACGTCTTGCAATTTTAAGAAGAACGTTTCTCTAACAGAATTCTAA 1248 0.5705 MDSATTAPPSPELHFDNLKALKILGKGAMGTVFLVHHTAAAATTPFALKVVDKTSLHAKLDAERRARWEIQVLSTLSHPFLPSLLGTFDSPELLAWAIPYCPGGDLNVLRYRQNDRVFSPSVIRFYLAEILCALDHLHAMGIAYRDLKPENVLIQNSGHVTLTDFDLSRKLAPKSLKTVPSPIPLPDSKLPEPRRKHRRNFSRWIPLLPPDVPNFNKSGLKKANSARVSPVSRRKLSFSDGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFKGKNRKETFRNVLTKPPGFVGKRSALTDLIEKLLEKDPKKRLGYGRGANEIKEHEFFRGVQWDLLTEVVRPPFIPAREDGTEDMPSAGNGGVDIRDYFQSLAPPPSLPPSPSPPTSCNFKKNVSLTEF* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0186 415 SMART serkin_6 18 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0186 415 ProSiteProfiles Protein kinase domain profile. 18 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0186 415 SUPERFAMILY Protein kinase-like (PK-like) 15 401 IPR011009 -
Apr5g0186 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Apr5g0186 415 PANTHER FLIPPASE KINASE 1-RELATED 13 389 - -
Apr5g0186 415 MobiDBLite consensus disorder prediction 362 415 - -
Apr5g0186 415 Pfam Protein kinase domain 20 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0186 415 Pfam Protein kinase domain 240 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0186 415 Gene3D Transferase(Phosphotransferase) domain 1 241 363 - -
Apr5g0186 415 PANTHER SERINE/THREONINE-PROTEIN KINASE UCNL 13 389 - -
Apr5g0186 415 ProSitePatterns Protein kinases ATP-binding region signature. 24 49 IPR017441 GO:0005524
Apr5g0186 415 Gene3D Transferase(Phosphotransferase) domain 1 105 174 - -
Apr5g0186 415 Gene3D Phosphorylase Kinase; domain 1 18 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0186 Apr-Chr5 1681556 1683680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0186 13 415 AGC Kinase Gene Family AT3G20830 62.228 1.67e-165 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Apr5g0186 Pkinase 6.9e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0186 - K08286 gmx:100785281 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2348 2 28299263 28300879 Apr5g0186 5 1681556 1683680 PCT