Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0176 ATGGCCTCCATAGCGCTCACAGCCTCCGCCACCACCCTCCCCTCCCTCCGCCTCCGCCGCAATCCACCACCGCTACGCCATTCCACCACTCTCAAACCCATCAAACCAAACCCTTTCCCTTCCATTTCATCCATCTCATCATTCCCAGCTAAACCCTTTCATCGGAAACCCCTCACTCTCACCGTCAGAGCCTCAGCCTCAGCCGCTTCTATAACTCCGGCTCCGGCGCCGGTTCCACCTCCGGCTCAGCCATGGCAAGGTGCCGCCATAAAACCCCTATTAGCTTCCATAGCTACAGGAGTTATACTCTGGTTCGTTCCCGTTCCCGCCGGTGTTAACCGTAACGCGTGGCAATTGCTGGCGATTTTCTTAGGCACAATCGTCGGCATTATCACGCAACCGTTACCCCTCGGCGCCGTCGCCATATTAGGGTTGGGAGTTTCGGTTCTCACCAAAACCCTAACGTTCGTCGCGGCCTTCTCCGGCTTCGGCGACCCCATTCCCTGGCTCATTTGCCTCGCCTTCTTCTTCGCCAAGGGATTCATCAAAACCGGCCTCGGAAACCGCGTGGCTTACCAATTCGTCTCGCTCTTCGGAAGCTCCTCGTTAGGGTTAGGTTACAGCTTGGTTTTCAGCGAGGCGTTGTTGGCACCGGCTATTCCTTCGGTTTCGGCGAGAGCGGGTGGGATTTTTCTTCCGTTGGTGAAATCACTGTGTGTGGCTTGTGGCAGTAACGTCGGCGACGGAACGGAGAACAAATTGGGGTCGTGGTTGATGCTTACTTGCTTTCAGACTTCGGTGATTACATCGGCGATGTTTTTGACAGCAATGGCGGCGAATCCCCTCTGTGCGACTCTGACACTGAACTCGATCAACCAAACCATTGGGTGGTTGGATTGGGCGAAAGCGGCGATCGTGCCTGGGTTGGCTTCGTTGGTGTTGGTGCCGTTGATCTTGTATGTTATATACCCTCCTACCCTGAAAACAAGCCCTGATGCTCCCAAGCTTGCTAGGGAGAAGTTGGAGAAGATGGGGCCCATGACGGCCCATGAGAAGATCATGACCGCTACTCTGTTTCTCACGGTTGGACTTTGGGTTTTTGGGGGGCTTCTTAACATTGATGCTGTATCTGCTGCAATTCTTGGATTAGCTGTACTTCTTGTTACTGGGGTTGTAACATGGAAGGAGTGCTTGGCTGAAGGAGTTGCTTGGGATACTCTTACATGGTTTGCTGCTCTCATTGCAATGGCTGGGTATTTGAACAAATATGGTCTCATTTCTTGGTTCAGTCAAACAGTAGTTAAGTTCGTTGGTGGATTGGGTCTATCATGGCAACTATCCTTTGGGATTCTAGTCCTTCTCTACTTCTACACCCATTACTTCTTTGCAAGTGGAGCTGCTCATATTGGTGCCATGTTTACTGCATTTTTGTCTGTTGCCACGGCTCTAGGGACCCCTCCATTCTTTGGAGCCATAGTACTGTCCTTCCTCTCCAACCTTATGGGCGGTCTTACTCATTATGGAATTGGATCAGCTCCTGTGTTTTTCGGTGCCAACTATGTTCCCCTTGCTAAATGGTGGGGTTATGGGTTCCTCATTAGTATTGTTAACATTATAATCTGGCTTGGGCTTGGAGGAGTTTGGTGGAAAGCCATTGGGTTGTGA 1665 0.5153 MASIALTASATTLPSLRLRRNPPPLRHSTTLKPIKPNPFPSISSISSFPAKPFHRKPLTLTVRASASAASITPAPAPVPPPAQPWQGAAIKPLLASIATGVILWFVPVPAGVNRNAWQLLAIFLGTIVGIITQPLPLGAVAILGLGVSVLTKTLTFVAAFSGFGDPIPWLICLAFFFAKGFIKTGLGNRVAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCVACGSNVGDGTENKLGSWLMLTCFQTSVITSAMFLTAMAANPLCATLTLNSINQTIGWLDWAKAAIVPGLASLVLVPLILYVIYPPTLKTSPDAPKLAREKLEKMGPMTAHEKIMTATLFLTVGLWVFGGLLNIDAVSAAILGLAVLLVTGVVTWKECLAEGVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYTHYFFASGAAHIGAMFTAFLSVATALGTPPFFGAIVLSFLSNLMGGLTHYGIGSAPVFFGANYVPLAKWWGYGFLISIVNIIIWLGLGGVWWKAIGL* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0176 554 CDD ArsB_NhaD_permease 127 549 - -
Apr5g0176 554 Pfam Sodium:sulfate symporter transmembrane region 92 553 IPR001898 GO:0016020|GO:0022857|GO:0055085
Apr5g0176 554 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 107 549 IPR001898 GO:0016020|GO:0022857|GO:0055085
Apr5g0176 554 PANTHER DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC 55 554 - -
Apr5g0176 554 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 55 554 IPR030676 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0176 Apr-Chr5 1588878 1592365 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0176 1 554 Antiporters AT5G12860 78.470 0.0 841
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0176 - - gmx:100796365 904.049